| General information | Literature | Expression | Regulation | Variant | Interaction |
Basic Information | |
|---|---|
Gene ID | 5097 |
Name | PCDH1 |
Synonymous | PC42|PCDH42;protocadherin 1;PCDH1;protocadherin 1 |
Definition | cadherin-like 1|cadherin-like protein 1|protocadherin 42|protocadherin-1|protocadherin-42 |
Position | 5q31.3 |
Gene Type | protein-coding |
Gene Regulation: | Transcription Factors Post Translational Modification From dbPTM Methylation Profile From DiseaseMeth database |
Transcription Factors [Top] |
Regulation From TransFac database | PCDH1(h) --> pcdh1(h) (expression). | PCDH1(h) --> pcdh1-isoform1(h) (expression). | PCDH1(h) --> pcdh1-isoform2(h) (expression). |
|---|
Post Translational Modification [Top] | |||
Location (AA) | PTM type | Literature | Database | 271 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 369 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 584 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 628 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 686 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 779 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 784 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 983 | Phosphotyrosine. | Swiss-Prot 53.0 | 988 | Phosphotyrosine. | Swiss-Prot 53.0 |
|---|---|---|---|
Methylation Profile [Top] | ||
Chromosome | Location | Source |
|---|---|---|
chr5 |
Promoter: 141237628 - 141239628 | Agilent_014791 |
chr5 |
Promoter: 141237628 - 141239628 | GoldenGate_Methylation_Cancer_Panel_I |
chr5 |
Promoter: 141237628 - 141239628 | GoldenGate_Methylation_Cancer_Panel_I |
chr5 |
Promoter: 141237628 - 141239628 | GSE27584 |
chr5 |
Promoter: 141237628 - 141239628 | GSE27584 |
chr5 |
Promoter: 141237628 - 141239628 | Agilent_014791_44K |