| General information | Literature | Expression | Regulation | Variant | Interaction |
Basic Information | |
|---|---|
Gene ID | 5097 |
Name | PCDH1 |
Synonym | PC42|PCDH42;protocadherin 1;PCDH1;protocadherin 1 |
Definition | cadherin-like 1|cadherin-like protein 1|protocadherin 42|protocadherin-1|protocadherin-42 |
Position | 5q31.3 |
Gene Type | protein-coding |
Pathways and Diseases | |
Pathway | Wnt signaling pathway;PANTHER;P00057 |
Pathway | Cadherin signaling pathway;PANTHER;P00012 |
External Links | |
Links to Entrez Gene | 5097 |
Links to all GeneRIF Items | 5097 |
Links to iHOP | 5097 |
Sequence Information | |
Nucleotide Sequence | >5097 : length: 3183 atggacagcggggcgggcggccggcgctgcccggaggcggccctcctgattctggggcct cccaggatggagcacctgaggcacagcccaggccctggggggcaacggctactgctgccc tccatgctgctagcactgctgctcctgctggctccatccccaggccacgccactcgggta gtgtacaaggtgccggaggaacagccacccaacaccctcattgggagcctcgcagccgac tatggttttccagatgtggggcacctgtacaagctagaggtgggtgccccgtaccttcgc gtggatggcaagacaggtgacattttcaccaccgagacctccatcgaccgtgaggggctc cgtgaatgccagaaccagctccctggtgatccctgcatcctggagtttgaggtatctatc acagacctcgtgcagaatggcagcccccggctgctagagggccagatagaagtacaagac atcaatgacaacacacccaacttcgcctcaccagtcatcactctggccatccctgagaac accaacatcggctcactcttccccatcccgctggcttcagaccgtgatgctggtcccaac ggtgtggcatcctatgagctgcaggctgggcctgaggcccaggagctatttgggctgcag gtggcagaggaccaggaggagaagcaaccacagctcattgtgatgggcaacctggaccgt gagcgctgggactcctatgacctcaccatcaaggtgcaggatggcggcagccccccacgc gccagcagtgccctgctgcgtgtcaccgtgcttgacaccaatgacaacgcccccaagttt gagcggccctcctatgaggccgaactatctgagaatagccccataggccactcggtcatc caggtgaaggccaatgactcagaccaaggtgccaatgcagaaatcgaatacacattccac caggcgcccgaagttgtgaggcgtcttcttcgactggacaggaacactggacttatcact gttcagggcccggtggaccgtgaggacctaagcaccctgcgcttctcagtgcttgctaag gaccgaggcaccaaccccaagagtgcccgtgcccaggtggttgtgaccgtgaaggacatg aatgacaatgcccccaccattgagatccggggcatagggctagtgactcatcaagatggg atggctaacatctcagaggatgtggcagaggagacagctgtggccctggtgcaggtgtct gaccgagatgagggagagaatgcagctgtcacctgtgtggtggcaggtgatgtgcccttc cagctgcgccaggccagtgagacaggcagtgacagcaagaagaagtatttcctgcagact accaccccgctagactacgagaaggtcaaagactacaccattgagattgtggctgtggac tctggcaaccccccactctccagcactaactccctcaaggtgcaggtggtggacgtcaat gacaacgcacctgtcttcactcagagtgtcactgaggtcgccttcccggaaaacaacaag cctggtgaagtgattgctgagatcactgccagtgatgctgactctggctctaatgctgag ctggtttactctctggagcctgagccggctgctaagggcctcttcaccatctcacccgag actggagagatccaggtgaagacatctctggatcgggaacagcgggagagctatgagttg aaggtggtggcagctgaccggggcagtcctagcctccagggcacagccactgtccttgtc aatgtgctggactgcaatgacaatgaccccaaatttatgctgagtggctacaacttctca gtgatggagaacatgccagcactgagtccagtgggcatggtgactgtcattgatggagac aagggggagaatgcccaggtgcagctctcagtggagcaggacaacggtgactttgttatc cagaatggcacaggcaccatcctatccagcctgagctttgatcgagagcaacaaagcacc tacaccttccagctgaaggcagtggatggtggcgtcccacctcgctcagcttacgttggt gtcaccatcaatgtgctggacgagaatgacaacgcaccctatatcactgccccttctaac acctctcacaagctgctgaccccccagacacgtcttggtgagacggtcagccaggtggca gccgaggactttgactctggtgtcaatgctgagctgatctacagcattgcaggtggcaac ccttatggactcttccagattgggtcacattcaggtgccatcaccctggagaaggagatt gagcggcgccaccatgggctacaccgcctggtggtgaaggtcagtgaccgcggcaagccc ccacgctatggcacagccttggtccatctttatgtcaatgagactctggccaaccgcacg ctgctggagaccctcctgggccacagcctggacacgccgctggatattgacattgctggg gatccagaatatgagcgctccaagcagcgtggcaacattctctttggtgtggtggctggt gtggtggccgtggccttgctcatcgccctggcggttcttgtgcgctactgcagacagcgg gaggccaaaagtggttaccaggctggtaagaaggagaccaaggacctgtatgcccccaag cccagtggcaaggcctccaagggaaacaaaagcaaaggcaagaagagcaagtccccaaag cccgtgaagccagtggaggacgaggatgaggccgggctgcagaagtccctcaagttcaac ctgatgagcgatgcccctggggacagtccccgcatccacctgcccctcaactacccacca ggcagccctgacctgggccgccactatcgctctaactccccactgccttccatccagctg cagccccagtcaccctcagcctccaagaagcaccaggtggtacaggacctgccacctgca aacacattcgtgggcaccggggacaccacgtccacgggctctgagcagtactccgactac agctaccgcaccaacccccccaaataccccagcaagcaggtaggccagccctttcagctc agcacaccccagcccctaccccacccctaccacggagccatctggaccgaggtgtgggag tga |
Protein Sequence | >5097 : length: 1060 MDSGAGGRRCPEAALLILGPPRMEHLRHSPGPGGQRLLLPSMLLALLLLLAPSPGHATRV VYKVPEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGL RECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPEN TNIGSLFPIPLASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDR ERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVI QVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAK DRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVS DRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVD SGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAE LVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVLV NVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSVEQDNGDFVI QNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSN TSHKLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEI ERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAG DPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPK PSGKASKGNKSKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPP GSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDY SYRTNPPKYPSKQVGQPFQLSTPQPLPHPYHGAIWTEVWE |