| General information | Literature | Expression | Regulation | Variant | Interaction |
Basic Information | |
|---|---|
Gene ID | 2956 |
Name | MSH6 |
Synonym | GTBP|HNPCC5|HSAP;mutS homolog 6 (E. coli);MSH6;mutS homolog 6 (E. coli) |
Definition | DNA mismatch repair protein Msh6|G/T mismatch-binding protein|GTMBP|hMSH6|mutS-alpha 160 kDa subunit|p160|sperm-associated protein |
Position | 2p16 |
Gene Type | protein-coding |
Pathways and Diseases | |
Pathway | Mismatch repair;KEGG PATHWAY;hsa03430 |
Pathway | Pathways in cancer;KEGG PATHWAY;hsa05200 |
Pathway | Colorectal cancer;KEGG PATHWAY;hsa05210 |
Disease | Colorectal cancer;KEGG DISEASE;H00020 |
Disease | Autoimmune disease;FunDO |
Disease | Cancers;KEGG DISEASE |
Disease | Endometrial cancer, familial;OMIM |
Disease | endometrial cancer;GAD |
Disease | Mismatch repair cancer syndrome;OMIM |
Disease | Rheumatoid arthritis;FunDO |
Disease | CANCER;GAD |
Disease | Cancer;FunDO |
Disease | Cancers of the digestive system;KEGG DISEASE |
Disease | Colorectal cancer, hereditary nonpolyposis, type 5;OMIM |
Disease | Yersinia infection;FunDO |
Disease | colorectal cancer;GAD |
External Links | |
Links to Entrez Gene | 2956 |
Links to all GeneRIF Items | 2956 |
Links to iHOP | 2956 |
Sequence Information | |
Nucleotide Sequence | >2956 : length: 4083 atgtcgcgacagagcaccctgtacagcttcttccccaagtctccggcgctgagtgatgcc aacaaggcctcggccagggcctcacgcgaaggcggccgtgccgccgctgcccccggggcc tctccttccccaggcggggatgcggcctggagcgaggctgggcctgggcccaggcccttg gcgcgctccgcgtcaccgcccaaggcgaagaacctcaacggagggctgcggagatcggta gcgcctgctgcccccaccagttgtgacttctcaccaggagatttggtttgggccaagatg gagggttacccctggtggccttgtctggtttacaaccacccctttgatggaacattcatc cgcgagaaagggaaatcagtccgtgttcatgtacagttttttgatgacagcccaacaagg ggctgggttagcaaaaggcttttaaagccatatacaggttcaaaatcaaaggaagcccag aagggaggtcatttttacagtgcaaagcctgaaatactgagagcaatgcaacgtgcagat gaagccttaaataaagacaagattaagaggcttgaattggcagtttgtgatgagccctca gagccagaagaggaagaagagatggaggtaggcacaacttacgtaacagataagagtgaa gaagataatgaaattgagagtgaagaggaagtacagcctaagacacaaggatctaggcga agtagccgccaaataaaaaaacgaagggtcatatcagattctgagagtgacattggtggc tctgatgtggaatttaagccagacactaaggaggaaggaagcagtgatgaaataagcagt ggagtgggggatagtgagagtgaaggcctgaacagccctgtcaaagttgctcgaaagcgg aagagaatggtgactggaaatggctctcttaaaaggaaaagctctaggaaggaaacgccc tcagccaccaaacaagcaactagcatttcatcagaaaccaagaatactttgagagctttc tctgcccctcaaaattctgaatcccaagcccacgttagtggaggtggtgatgacagtagt cgccctactgtttggtatcatgaaactttagaatggcttaaggaggaaaagagaagagat gagcacaggaggaggcctgatcaccccgattttgatgcatctacactctatgtgcctgag gatttcctcaattcttgtactcctgggatgaggaagtggtggcagattaagtctcagaac tttgatcttgtcatctgttacaaggtggggaaattttatgagctgtaccacatggatgct cttattggagtcagtgaactggggctggtattcatgaaaggcaactgggcccattctggc tttcctgaaattgcatttggccgttattcagattccctggtgcagaagggctataaagta gcacgagtggaacagactgagactccagaaatgatggaggcacgatgtagaaagatggca catatatccaagtatgatagagtggtgaggagggagatctgtaggatcattaccaagggt acacagacttacagtgtgctggaaggtgatccctctgagaactacagtaagtatcttctt agcctcaaagaaaaagaggaagattcttctggccatactcgtgcatatggtgtgtgcttt gttgatacttcactgggaaagtttttcataggtcagttttcagatgatcgccattgttcg agatttaggactctagtggcacactatcccccagtacaagttttatttgaaaaaggaaat ctctcaaaggaaactaaaacaattctaaagagttcattgtcctgttctcttcaggaaggt ctgatacccggctcccagttttgggatgcatccaaaactttgagaactctccttgaggaa gaatattttagggaaaagctaagtgatggcattggggtgatgttaccccaggtgcttaaa ggtatgacttcagagtctgattccattgggttgacaccaggagagaaaagtgaattggcc ctctctgctctaggtggttgtgtcttctacctcaaaaaatgccttattgatcaggagctt ttatcaatggctaattttgaagaatatattcccttggattctgacacagtcagcactaca agatctggtgctatcttcaccaaagcctatcaacgaatggtgctagatgcagtgacatta aacaacttggagatttttctgaatggaacaaatggttctactgaaggaaccctactagag agggttgatacttgccatactccttttggtaagcggctcctaaagcaatggctttgtgcc ccactctgtaaccattatgctattaatgatcgtctagatgccatagaagacctcatggtt gtgcctgacaaaatctccgaagttgtagagcttctaaagaagcttccagatcttgagagg ctactcagtaaaattcataatgttgggtctcccctgaagagtcagaaccacccagacagc agggctataatgtatgaagaaactacatacagcaagaagaagattattgattttctttct gctctggaaggattcaaagtaatgtgtaaaattatagggatcatggaagaagttgctgat ggttttaagtctaaaatccttaagcaggtcatctctctgcagacaaaaaatcctgaaggt cgttttcctgatttgactgtagaattgaaccgatgggatacagcctttgaccatgaaaag gctcgaaagactggacttattactcccaaagcaggctttgactctgattatgaccaagct cttgctgacataagagaaaatgaacagagcctcctggaatacctagagaaacagcgcaac agaattggctgtaggaccatagtctattgggggattggtaggaaccgttaccagctggaa attcctgagaatttcaccactcgcaatttgccagaagaatacgagttgaaatctaccaag aagggctgtaaacgatactggaccaaaactattgaaaagaagttggctaatctcataaat gctgaagaacggagggatgtatcattgaaggactgcatgcggcgactgttctataacttt gataaaaattacaaggactggcagtctgctgtagagtgtatcgcagtgttggatgtttta ctgtgcctggctaactatagtcgagggggtgatggtcctatgtgtcgcccagtaattctg ttgccggaagataccccccccttcttagagcttaaaggatcacgccatccttgcattacg aagactttttttggagatgattttattcctaatgacattctaataggctgtgaggaagag gagcaggaaaatggcaaagcctattgtgtgcttgttactggaccaaatatggggggcaag tctacgcttatgagacaggctggcttattagctgtaatggcccagatgggttgttacgtc cctgctgaagtgtgcaggctcacaccaattgatagagtgtttactagacttggtgcctca gacagaataatgtcaggtgaaagtacattttttgttgaattaagtgaaactgccagcata ctcatgcatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgca acatttgatgggacggcaatagcaaatgcagttgttaaagaacttgctgagactataaaa tgtcgtacattattttcaactcactaccattcattagtagaagattattctcaaaatgtt gctgtgcgcctaggacatatggcatgcatggtagaaaatgaatgtgaagaccccagccag gagactattacgttcctctataaattcattaagggagcttgtcctaaaagctatggcttt aatgcagcaaggcttgctaatctcccagaggaagttattcaaaagggacatagaaaagca agagaatttgagaagatgaatcagtcactacgattatttcgggaagtttgcctggctagt gaaaggtcaactgtagatgctgaagctgtccataaattgctgactttgattaaggaatta tag |
Protein Sequence | >2956 : length: 1360 MSRQSTLYSFFPKSPALSDANKASARASREGGRAAAAPGASPSPGGDAAWSEAGPGPRPL ARSASPPKAKNLNGGLRRSVAPAAPTSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI REKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQRAD EALNKDKIKRLELAVCDEPSEPEEEEEMEVGTTYVTDKSEEDNEIESEEEVQPKTQGSRR SSRQIKKRRVISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKR KRMVTGNGSLKRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSS RPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQN FDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKV ARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYSVLEGDPSENYSKYLL SLKEKEEDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN LSKETKTILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLK GMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVSTT RSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCA PLCNHYAINDRLDAIEDLMVVPDKISEVVELLKKLPDLERLLSKIHNVGSPLKSQNHPDS RAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKNPEG RFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRN RIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLIN AEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVIL LPEDTPPFLELKGSRHPCITKTFFGDDFIPNDILIGCEEEEQENGKAYCVLVTGPNMGGK STLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASI LMHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNV AVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKA REFEKMNQSLRLFREVCLASERSTVDAEAVHKLLTLIKEL |