Pediatric cancer gene database (Pedican) Home
Pedican
Pediatric cancer database
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

2175

Name

FANCA

Synonym

FA|FA-H|FA1|FAA|FACA|FAH|FANCH;Fanconi anemia, complementation group A;FANCA;Fanconi anemia, complementation group A

Definition

Fanconi anemia group A protein|Fanconi anemia, complementation group H|Fanconi anemia, type 1

Position

16q24.3

Gene Type

protein-coding

Pathways and Diseases

Pathway

BARD1 signaling events;PID Curated;200174

Pathway

DNA Repair;Reactome;REACT:216

Pathway

brca1 dependent ub ligase activity;PID BioCarta;100232

Disease

Hematologic diseases;KEGG DISEASE

Disease

Fanconi's anemia;FunDO

Disease

Circulatory system diseases;KEGG DISEASE

Disease

Fanconi anemia, complementation group A;OMIM

Disease

Ovarian cancer;FunDO

Disease

Leukemia;FunDO

Disease

CANCER;GAD

Disease

cervical intraepithelial neoplasia grade 3;GAD

Disease

Fanconi anemia;KEGG DISEASE;H00238

Disease

Pancreas cancer;FunDO

Disease

Breast cancer;FunDO

External Links

Links to Entrez Gene

2175

Links to all GeneRIF Items

2175

Links to iHOP

2175

Sequence Information

Nucleotide Sequence

>2175 : length: 4368
atgtccgactcgtgggtcccgaactccgcctcgggccaggacccagggggccgccggagg
gcctgggccgagctgctggcgggaagggtcaagagggaaaaatataatcctgaaagggca
cagaaattaaaggaatcagctgtgcgcctcctgcgaagccatcaggacctgaatgccctt
ttgcttgaggtagaaggtccactgtgtaaaaaattgtctctcagcaaagtgattgactgt
gacagttctgaggcctatgctaatcattctagttcatttataggctctgctttgcaggat
caagcctcaaggctgggggttcccgtgggtattctctcagccgggatggttgcctctagc
gtgggacagatctgcacggctccagcggagaccagtcaccctgtgctgctgactgtggag
cagagaaagaagctgtcttccctgttagagtttgctcagtatttattggcacacagtatg
ttctcccgtctttccttctgtcaagaattatggaaaatacagagttctttgttgcttgaa
gcggtgtggcatcttcacgtacaaggcattgtgagcctgcaagagctgctggaaagccat
cccgacatgcatgctgtgggatcgtggctcttcaggaatctgtgctgcctttgtgaacag
atggaagcatcctgccagcatgctgacgtcgccagggccatgctttctgattttgttcaa
atgtttgttttgaggggatttcagaaaaactcagatctgagaagaactgtggagcctgaa
aaaatgccgcaggtcacggttgatgtactgcagagaatgctgatttttgcacttgacgct
ttggctgctggagtacaggaggagtcctccactcacaagatcgtgaggtgctggttcgga
gtgttcagtggacacacgcttggcagtgtaatttccacagatcctctgaagaggttcttc
agtcataccctgactcagatactcactcacagccctgtgctgaaagcatctgatgctgtt
cagatgcagagagagtggagctttgcgcggacacaccctctgctcacctcactgtaccgc
aggctctttgtgatgctgagtgcagaggagttggttggccatttgcaagaagttctggaa
acgcaggaggttcactggcagagagtgctctcctttgtgtctgccctggttgtctgcttt
ccagaagcgcagcagctgcttgaagactgggtggcgcgtttgatggcccaggcattcgag
agctgccagctggacagcatggtcactgcgttcctggttgtgcgccaggcagcactggag
ggcccctctgcgttcctgtcatatgcagactggttcaaggcctcctttgggagcacacga
ggctaccatggctgcagcaagaaggccctggtcttcctgtttacgttcttgtcagaactc
gtgccttttgagtctccccggtacctgcaggtgcacattctccacccacccctggttccc
ggcaagtaccgctccctcctcacagactacatctcattggccaagacacggctggccgac
ctcaaggtttctatagaaaacatgggactctacgaggatttgtcatcagctggggacatt
actgagccccacagccaagctcttcaggatgttgaaaaggccatcatggtgtttgagcat
acggggaacatcccagtcaccgtcatggaggccagcatattcaggaggccttactacgtg
tcccacttcctccccgccctgctcacacctcgagtgctccccaaagtccctgactcccgt
gtggcgtttatagagtctctgaagagagcagataaaatccccccatctctgtactccacc
tactgccaggcctgctctgctgctgaagagaagccagaagatgcagccctgggagtgagg
gcagaacccaactctgctgaggagcccctgggacagctcacagctgcactgggagagctg
agagcctccatgacagaccccagccagcgtgatgttatatcggcacaggtggcagtgatt
tctgaaagactgagggctgtcctgggccacaatgaggatgacagcagcgttgagatatca
aagattcagctcagcatcaacacgccgagactggagccacgggaacacatggctgtggac
ctcctgctgacgtctttctgtcagaacctgatggctgcctccagtgtcgctcccccggag
aggcagggtccctgggctgccctcttcgtgaggaccatgtgtggacgtgtgctccctgca
gtgctcacccggctctgccagctgctccgtcaccagggcccgagcctgagtgccccacat
gtgctggggttggctgccctggccgtgcacctgggtgagtccaggtctgcgctcccagag
gtggatgtgggtcctcctgcacctggtgctggccttcctgtccctgcgctctttgacagc
ctcctgacctgtaggacgagggattccttgttcttctgcctgaaattttgtacagcagca
atttcttactctctctgcaagttttcttcccagtcacgagatactttgtgcagctgctta
tctccaggccttattaaaaagtttcagttcctcatgttcagattgttctcagaggcccga
cagcctctttctgaggaggacgtagccagcctttcctggagacccttgcaccttccttct
gcagactggcagagagctgccctctctctctggacacacagaaccttccgagaggtgttg
aaagaggaagatgttcacttaacttaccaagactggttacacctggagctggaaattcaa
cctgaagctgatgctctttcagatactgaacggcaggacttccaccagtgggcgatccat
gagcactttctccctgagtcctcggcttcagggggctgtgacggagacctgcaggctgcg
tgtaccattcttgtcaacgcactgatggatttccaccaaagctcaaggagttatgaccac
tcagaaaattctgatttggtctttggtggccgcacaggaaatgaggatattatttccaga
ttgcaggagatggtagctgacctggagctgcagcaagacctcatagtgcctctcggccac
accccttcccaggagcacttcctctttgagattttccgcagacggctccaggctctgaca
agcgggtggagcgtggctgccagccttcagagacagagggagctgctaatgtacaaacgg
atcctcctccgcctgccttcgtctgtcctctgcggcagcagcttccaggcagaacagccc
atcactgccagatgcgagcagttcttccacttggtcaactctgagatgagaaacttctgc
tcccacggaggtgccctgacacaggacatcactgcccacttcttcaggggcctcctgaac
gcctgtctgcggagcagagacccctccctgatggtcgacttcatactggccaagtgccag
acgaaatgccccttaattttgacctctgctctggtgtggtggccgagcctggagcctgtg
ctgctctgccggtggaggagacactgccagagcccgctgccccgggaactgcagaagcta
caagaaggccggcagtttgccagcgatttcctctcccctgaggctgcctccccagcaccc
aacccggactggctctcagctgctgcactgcactttgcgattcaacaagtcagggaagaa
aacatcaggaagcagctaaagaagctggactgcgagagagaggagctattggttttcctt
ttcttcttctccttgatgggcctgctgtcgtcacatctgacctcaaatagcaccacagac
ctgccaaaggctttccacgtttgtgcagcaatcctcgagtgtttagagaagaggaagata
tcctggctggcactctttcagttgacagagagtgacctcaggctggggcggctcctcctc
cgtgtggccccggatcagcacaccaggctgctgcctttcgctttttacagtcttctctcc
tacttccatgaagacgcggccatcagggaagaggccttcctgcatgttgctgtggacatg
tacttgaagctggtccagctcttcgtggctggggatacaagcacagtttcacctccagct
ggcaggagcctggagctcaagggtcagggcaaccccgtggaactgataacaaaagctcgt
ctttttctgctgcagttaatacctcggtgcccgaaaaagagcttctcacacgtggcagag
ctgctggctgatcgtggggactgcgacccagaggtgagcgccgccctccagagcagacag
caggctgcccctgacgctgacctgtcccaggagcctcatctcttctga

Protein Sequence

>2175 : length: 1455
MSDSWVPNSASGQDPGGRRRAWAELLAGRVKREKYNPERAQKLKESAVRLLRSHQDLNAL
LLEVEGPLCKKLSLSKVIDCDSSEAYANHSSSFIGSALQDQASRLGVPVGILSAGMVASS
VGQICTAPAETSHPVLLTVEQRKKLSSLLEFAQYLLAHSMFSRLSFCQELWKIQSSLLLE
AVWHLHVQGIVSLQELLESHPDMHAVGSWLFRNLCCLCEQMEASCQHADVARAMLSDFVQ
MFVLRGFQKNSDLRRTVEPEKMPQVTVDVLQRMLIFALDALAAGVQEESSTHKIVRCWFG
VFSGHTLGSVISTDPLKRFFSHTLTQILTHSPVLKASDAVQMQREWSFARTHPLLTSLYR
RLFVMLSAEELVGHLQEVLETQEVHWQRVLSFVSALVVCFPEAQQLLEDWVARLMAQAFE
SCQLDSMVTAFLVVRQAALEGPSAFLSYADWFKASFGSTRGYHGCSKKALVFLFTFLSEL
VPFESPRYLQVHILHPPLVPGKYRSLLTDYISLAKTRLADLKVSIENMGLYEDLSSAGDI
TEPHSQALQDVEKAIMVFEHTGNIPVTVMEASIFRRPYYVSHFLPALLTPRVLPKVPDSR
VAFIESLKRADKIPPSLYSTYCQACSAAEEKPEDAALGVRAEPNSAEEPLGQLTAALGEL
RASMTDPSQRDVISAQVAVISERLRAVLGHNEDDSSVEISKIQLSINTPRLEPREHMAVD
LLLTSFCQNLMAASSVAPPERQGPWAALFVRTMCGRVLPAVLTRLCQLLRHQGPSLSAPH
VLGLAALAVHLGESRSALPEVDVGPPAPGAGLPVPALFDSLLTCRTRDSLFFCLKFCTAA
ISYSLCKFSSQSRDTLCSCLSPGLIKKFQFLMFRLFSEARQPLSEEDVASLSWRPLHLPS
ADWQRAALSLWTHRTFREVLKEEDVHLTYQDWLHLELEIQPEADALSDTERQDFHQWAIH
EHFLPESSASGGCDGDLQAACTILVNALMDFHQSSRSYDHSENSDLVFGGRTGNEDIISR
LQEMVADLELQQDLIVPLGHTPSQEHFLFEIFRRRLQALTSGWSVAASLQRQRELLMYKR
ILLRLPSSVLCGSSFQAEQPITARCEQFFHLVNSEMRNFCSHGGALTQDITAHFFRGLLN
ACLRSRDPSLMVDFILAKCQTKCPLILTSALVWWPSLEPVLLCRWRRHCQSPLPRELQKL
QEGRQFASDFLSPEAASPAPNPDWLSAAALHFAIQQVREENIRKQLKKLDCEREELLVFL
FFFSLMGLLSSHLTSNSTTDLPKAFHVCAAILECLEKRKISWLALFQLTESDLRLGRLLL
RVAPDQHTRLLPFAFYSLLSYFHEDAAIREEAFLHVAVDMYLKLVQLFVAGDTSTVSPPA
GRSLELKGQGNPVELITKARLFLLQLIPRCPKKSFSHVAELLADRGDCDPEVSAALQSRQ
QAAPDADLSQEPHLF



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