| General information | Literature | Expression | Regulation | Variant | Interaction |
Basic Information | |
|---|---|
Gene ID | 6382 |
Name | SDC1 |
Synonymous | CD138|SDC|SYND1|syndecan;syndecan 1;SDC1;syndecan 1 |
Definition | CD138 antigen|heparan sulfate proteoglycan fibroblast growth factor receptor|syndecan proteoglycan 1|syndecan-1 |
Position | 2p24.1 |
Gene Type | protein-coding |
Gene Regulation: | Transcription Factors Post Translational Modification From dbPTM Methylation Profile From DiseaseMeth database |
Transcription Factors [Top] |
Regulation From TransFac database | Syntenin(m.s.) + SDC1(h) <==> Syntenin(m.s.):SDC1(h) (binding) | SDC1(h) --> SDC1(h) (expression). | SDC1(h) --> SDC1(h) (expression). |
|---|
Post Translational Modification [Top] | |||
Location (AA) | PTM type | Literature | Database | 37 | O-linked (Xyl...) (chondroitin sulfate)(By similarity). | Swiss-Prot 53.0 | 43 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 45 | O-linked (Xyl...) (heparan sulfate) (Bysimilarity). | Swiss-Prot 53.0 | 47 | O-linked (Xyl...) (heparan sulfate) (Bysimilarity). | Swiss-Prot 53.0 | 206 | O-linked (Xyl...) (chondroitin sulfate)(By similarity). | Swiss-Prot 53.0 | 216 | O-linked (Xyl...) (chondroitin sulfate)(By similarity). | Swiss-Prot 53.0 |
|---|---|---|---|
Methylation Profile [Top] | ||
Chromosome | Location | Source |
|---|---|---|
chr2 |
Promoter: 20288175 - 20290175 | Agilent_014791 |
chr2 |
Promoter: 20287908 - 20289908 | Agilent_014791 |
chr2 |
Promoter: 20287908 - 20289908 | GSE27584 |
chr2 |
Promoter: 20288175 - 20290175 | GSE27584 |
chr2 |
Promoter: 20288175 - 20290175 | Agilent_014791_44K |