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Pedican
Pediatric cancer database
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

5979

Name

RET

Synonymous

CDHF12|CDHR16|HSCR1|MEN2A|MEN2B|MTC1|PTC|RET-ELE1|RET51;ret proto-oncogene;RET;ret proto-oncogene

Definition

RET transforming sequence|cadherin family member 12|cadherin-related family member 16|hydroxyaryl-protein kinase|proto-oncogene c-Ret|proto-oncogene tyrosine-protein kinase receptor Ret|receptor tyrosine kinase|ret proto-oncogene (multiple endocrine neopl

Position

10q11.2

Gene Type

protein-coding

Gene Regulation:

Transcription Factors
Post Translational Modification From dbPTM
Methylation Profile From DiseaseMeth database

Transcription Factors   [Top]

Regulation From TransFac database

RET(h) --> Ret-1(h) (expression).
RET(h) --> Ret-2(h) (expression).
NTN(h) + GFR-alpha-2(h) + Ret(h) <==> NTN(h):GFR-alpha-2(h):Ret(h) (binding)
Ret(h) + SHP-1(h) <==> Ret(h):SHP-1(h) (binding)
RET(h) --> Ret(h) (expression).

Post Translational Modification   [Top]

Location (AA)

PTM type

Literature

Database

98N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
151N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
199N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
336N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
343N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
361N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
367N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
377N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
394N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
448N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
468N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
554N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
806Phosphotyrosine (by autocatalysis).Swiss-Prot 53.0
809Phosphotyrosine (by autocatalysis).Swiss-Prot 53.0
900Phosphotyrosine (by autocatalysis).Swiss-Prot 53.0
905Phosphotyrosine (by autocatalysis).Swiss-Prot 53.0
981Phosphotyrosine (by autocatalysis).Swiss-Prot 53.0
1015Phosphotyrosine (by autocatalysis).Swiss-Prot 53.0
1062Phosphotyrosine (by autocatalysis).Swiss-Prot 53.0
1090Phosphotyrosine (by autocatalysis).Swiss-Prot 53.0
1096Phosphotyrosine (by autocatalysis).Swiss-Prot 53.0
687Phosphotyrosine (Ret)11470823;8621380Phospho.ELM 6.0
1015Phosphotyrosine (Ret)11470823;14981541Phospho.ELM 6.0
1029Phosphotyrosine (Ret)11470823;8621380;14766744Phospho.ELM 6.0
1062Phosphotyrosine (Ret)11470823;14711813;14981541Phospho.ELM 6.0
1096Phosphotyrosine (Ret)11470823;8621380;14711813Phospho.ELM 6.0
826Phosphotyrosine (Ret)11470823;8621380Phospho.ELM 6.0
1090Phosphotyrosine (Ret)14711813Phospho.ELM 6.0
806Phosphotyrosine (Ret)14711813Phospho.ELM 6.0
809Phosphotyrosine (Ret)14711813Phospho.ELM 6.0
900Phosphotyrosine (Ret)14711813Phospho.ELM 6.0
905Phosphotyrosine (Ret)14711813Phospho.ELM 6.0
981Phosphotyrosine (Ret)14711813;14766744Phospho.ELM 6.0
696Phosphoserine11886862Phospho.ELM 6.0
891Phosphoserine15753368Phospho.ELM 6.0
791Phosphotyrosine15753368Phospho.ELM 6.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr10

Promoter: 42891033 - 42893033Agilent_014791

chr10

Promoter: 42891033 - 42893033GoldenGate_Methylation_Cancer_Panel_I

chr10

Promoter: 42891033 - 42893033GoldenGate_Methylation_Cancer_Panel_I

chr10

Promoter: 42891033 - 42893033GSE27584

chr10

Promoter: 42891033 - 42893033GSE27584

chr10

Promoter: 42891033 - 42893033Agilent_014791_44K


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