Pediatric cancer gene database (Pedican) Home
Pedican
Pediatric cancer database
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

2668

Name

GDNF

Synonymous

ATF1|ATF2|HFB1-GDNF|HSCR3;glial cell derived neurotrophic factor;GDNF;glial cell derived neurotrophic factor

Definition

ATF|astrocyte-derived trophic factor|glial cell line-derived neurotrophic factor

Position

5p13.1-p12

Gene Type

protein-coding

Gene Regulation:

Transcription Factors
Post Translational Modification From dbPTM
Methylation Profile From DiseaseMeth database

Transcription Factors   [Top]

Regulation From TransFac database

GDNF(h) --> GDNF-isoform1(h) (expression).
GDNF(h) --> GDNF-isoform2(h) (expression).
GDNF(h) --> GDNF-isoform3(h) (expression).
GDNF(h) --> GDNF-isoform4(h) (expression).
GDNF(h) --> GDNF(h) (expression).

Post Translational Modification   [Top]

Location (AA)

PTM type

Literature

Database

126N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
162N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr5

Promoter: 37875039 - 37877039Agilent_014791

chr5

Promoter: 37870850 - 37872850Agilent_014791

chr5

Promoter: 37870155 - 37872155Agilent_014791

chr5

Promoter: 37875039 - 37877039GSE27584

chr5

Promoter: 37870155 - 37872155GSE27584

chr5

Promoter: 37870850 - 37872850GSE27584

chr5

Promoter: 37875039 - 37877039Agilent_014791_44K


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