| General information | Literature | Expression | Regulation | Variant | Interaction |
Basic Information | |
|---|---|
Gene ID | 4045 |
Name | LSAMP |
Synonymous | IGLON3|LAMP;limbic system-associated membrane protein;LSAMP;limbic system-associated membrane protein |
Definition | IgLON family member 3 |
Position | 3q13.2-q21 |
Gene Type | protein-coding |
Gene Mutation: | PCGP germline mutation PCGP somatic mutation COSMIC somatic mutation |
PCGP germline mutation [Top] | ||
There is no record for LSAMP | ||
PCGP somatic mutation [Top] | ||
Variant (Variant; Chr; Position) | Genotype (MutationType; MutationClass; ReferenceAllele; Genotype; Origin) | Disease (CancerType; ValidationStatus; SequencingType) |
|---|---|---|
LSAMP_V211V; chr3; 115571346 |
SUB; SILENT; G; G/T; SOMATIC | MB; VALID; WGS |
COSMIC somatic mutation [Top] | ||
Mutation (CDS; AA; Chr) | Site | Histology |
|---|---|---|
c.972G>C; p.L324L; |
lung | carcinoma; non_small_cell_carcinoma |
c.160G>A; p.V54I; |
large_intestine; colon | carcinoma; adenocarcinoma |
c.279A>C; p.E93D; |
large_intestine; colon | carcinoma; adenocarcinoma |
c.615G>A; p.S205S; |
stomach | carcinoma; adenocarcinoma |
c.770+6T>C; p.?; |
liver | carcinoma |
c.962C>T; p.A321V; |
upper_aerodigestive_tract; mouth | carcinoma; squamous_cell_carcinoma |
c.252T>G; p.V84V; |
lung | carcinoma; adenocarcinoma |
c.250G>A; p.V84I; |
lung | carcinoma; adenocarcinoma |
c.606G>A; p.E202E; |
lung | carcinoma; adenocarcinoma |
c.183G>T; p.K61N; |
lung | carcinoma; adenocarcinoma |
c.709C>T; p.L237F; |
skin; trunk | malignant_melanoma |
c.77G>A; p.G26E; |
skin; trunk | malignant_melanoma |
c.677G>T; p.S226I; |
pancreas | carcinoma; ductal_carcinoma |
c.677G>T; p.S226I; |
NS | NS |
c.445G>A; p.V149M; |
breast | carcinoma |
c.126C>T; p.T42T; |
bone | other; giant_cell_tumour |
c.692C>G; p.T231R; |
liver | carcinoma |
c.633C>A; p.V211V; |
central_nervous_system; brain | primitive_neuroectodermal_tumour-medulloblastoma |
c.382G>T; p.V128L; |
endometrium | carcinoma; serous_carcinoma |
c.320G>T; p.G107V; |
lung | carcinoma; adenocarcinoma |
c.93C>A; p.S31R; |
lung | carcinoma; adenocarcinoma |
c.822C>A; p.S274S; |
lung | carcinoma; adenocarcinoma |
c.125C>T; p.T42I; |
lung | carcinoma; adenocarcinoma |
c.801G>A; p.K267K; |
lung | carcinoma; squamous_cell_carcinoma |
c.512C>A; p.T171N; |
lung | carcinoma; squamous_cell_carcinoma |
c.888G>T; p.L296L; |
lung | carcinoma; squamous_cell_carcinoma |
c.706T>A; p.S236T; |
ovary | carcinoma; serous_carcinoma |
c.240G>T; p.L80L; |
lung | carcinoma; adenocarcinoma |
c.906C>A; p.S302R; |
lung; right_lower_lobe | carcinoma; adenocarcinoma |
c.619G>A; p.D207N; |
lung | carcinoma; squamous_cell_carcinoma |
c.831G>A; p.V277V; |
lung | carcinoma; adenocarcinoma |
c.288C>T; p.L96L; |
lung | carcinoma; adenocarcinoma |
c.514+2T>A; p.?; |
lung; right_lower_lobe | carcinoma; adenocarcinoma |
c.18G>T; p.Q6H; |
lung | carcinoma; squamous_cell_carcinoma |
c.962C>A; p.A321D; |
lung; right_upper_lobe | carcinoma; adenocarcinoma |
c.732G>A; p.V244V; |
lung; right_upper_lobe | carcinoma; adenocarcinoma |
c.344C>A; p.T115K; |
lung; right_upper_lobe | carcinoma; adenocarcinoma |
c.290G>A; p.R97Q; |
endometrium | carcinoma; endometrioid_carcinoma |
c.818C>A; p.S273Y; |
large_intestine; caecum | carcinoma; adenocarcinoma |
c.908T>C; p.L303P; |
large_intestine; caecum | carcinoma; adenocarcinoma |
c.382G>A; p.V128I; |
large_intestine; colon | carcinoma; adenocarcinoma |
c.290G>A; p.R97Q; |
large_intestine; colon | carcinoma; adenocarcinoma |
c.438C>A; p.G146G; |
large_intestine; colon | carcinoma; adenocarcinoma |
c.25C>T; p.R9W; |
endometrium | carcinoma; endometrioid_carcinoma |
c.290G>A; p.R97Q; |
endometrium | carcinoma; endometrioid_carcinoma |
c.719A>G; p.E240G; |
kidney | carcinoma; clear_cell_renal_cell_carcinoma |
c.25C>T; p.R9W; |
endometrium | carcinoma; endometrioid_carcinoma |
c.138G>T; p.G46G; |
endometrium | carcinoma; endometrioid_carcinoma |
c.375C>A; p.Y125*; |
endometrium | carcinoma; endometrioid_carcinoma |
c.827C>T; p.T276M; |
large_intestine; colon | carcinoma; adenocarcinoma |
c.912C>A; p.V304V; |
large_intestine; caecum | carcinoma; adenocarcinoma |
c.929C>T; p.S310L; |
endometrium | carcinoma; endometrioid_carcinoma |
c.272C>A; p.S91Y; |
endometrium | carcinoma; endometrioid_carcinoma |
c.535G>A; p.E179K; |
cervix | carcinoma; squamous_cell_carcinoma |
c.894C>T; p.V298V; |
cervix | carcinoma; squamous_cell_carcinoma |
c.954C>T; p.I318I; |
breast | carcinoma |
c.856G>A; p.G286S; |
large_intestine; colon | carcinoma; adenocarcinoma |
c.837C>T; p.N279N; |
prostate | carcinoma |
c.793G>A; p.E265K; |
skin | malignant_melanoma |
c.205G>A; p.G69S; |
skin; face | carcinoma; squamous_cell_carcinoma |
c.520G>A; p.E174K; |
skin; scalp | carcinoma; squamous_cell_carcinoma |
c.354G>T; p.E118D; |
kidney | carcinoma; clear_cell_renal_cell_carcinoma |