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Pedican
Pediatric cancer database
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

4004

Name

LMO1

Synonymous

RBTN1|RHOM1|TTG1;LIM domain only 1 (rhombotin 1);LMO1;LIM domain only 1 (rhombotin 1)

Definition

LIM domain only protein 1|LMO-1|T-cell translocation protein 1|cysteine-rich protein TTG-1|rhombotin-1

Position

11p15

Gene Type

protein-coding

Gene Mutation:

PCGP germline mutation
PCGP somatic mutation
COSMIC somatic mutation

PCGP germline mutation   [Top]

There is no record for LMO1

PCGP somatic mutation   [Top]

Variant (Variant; Chr; Position)

Genotype (MutationType; MutationClass; ReferenceAllele; Genotype; Origin)

Disease (CancerType; ValidationStatus; SequencingType)

LMO1_E1_UTR_5; chr11; 8285070

SUB; UTR_5; C; C/T; SOMATICRHB; VALID; WGS

COSMIC somatic mutation   [Top]

Mutation (CDS; AA; Chr)

Site

Histology

c.210C>T; p.G70G;

oesophaguscarcinoma; adenocarcinoma

c.512A>G; p.H171R;

livercarcinoma

c.196G>T; p.D66Y;

lungcarcinoma; adenocarcinoma

c.511C>T; p.H171Y;

skin; trunkmalignant_melanoma

c.318C>G; p.H106Q;

breastcarcinoma

c.298G>A; p.A100T;

kidneycarcinoma; clear_cell_renal_cell_carcinoma

c.630C>T; p.G210G;

endometriumcarcinoma; endometrioid_carcinoma

c.226G>A; p.V76I;

endometriumcarcinoma; endometrioid_carcinoma

c.327C>T; p.C109C;

endometriumcarcinoma; endometrioid_carcinoma

c.441G>A; p.G147G;

endometriumcarcinoma; endometrioid_carcinoma

c.319G>A; p.E107K;

endometriumcarcinoma; endometrioid_carcinoma

c.284G>A; p.R95H;

endometriumcarcinoma; endometrioid_carcinoma

c.624C>T; p.L208L;

cervixcarcinoma; squamous_cell_carcinoma

c.284G>A; p.R95H;

large_intestine; caecumcarcinoma; adenocarcinoma


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