Pediatric cancer gene database (Pedican) Home
Pedican
Pediatric cancer database
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

3146

Name

HMGB1

Synonymous

HMG1|HMG3|SBP-1;high mobility group box 1;HMGB1;high mobility group box 1

Definition

Amphoterin|HMG-1|Sulfoglucuronyl carbohydrate binding protein|high mobility group protein 1|high mobility group protein B1|high-mobility group (nonhistone chromosomal) protein 1|high-mobility group box 1

Position

13q12

Gene Type

protein-coding

Gene Mutation:

PCGP germline mutation
PCGP somatic mutation
COSMIC somatic mutation

PCGP germline mutation   [Top]

There is no record for HMGB1

PCGP somatic mutation   [Top]

There is no record for HMGB1

COSMIC somatic mutation   [Top]

Mutation (CDS; AA; Chr)

Site

Histology

c.374T>A; p.V125D;

haematopoietic_and_lymphoid_tissue; lymph_nodelymphoid_neoplasm; diffuse_large_B_cell_lymphoma

c.313T>C; p.F105L;

haematopoietic_and_lymphoid_tissue; lymph_nodelymphoid_neoplasm; diffuse_large_B_cell_lymphoma

c.71G>A; p.R24Q;

haematopoietic_and_lymphoid_tissuehaematopoietic_neoplasm; acute_myeloid_leukaemia

c.151A>T; p.T51S;

bonechondrosarcoma

c.296+1G>A; p.?; 13:29935343-29935343

ovarycarcinoma; serous_carcinoma

c.312C>A; p.L104L;

lungcarcinoma; squamous_cell_carcinoma

c.177A>G; p.K59K;

endometriumcarcinoma; endometrioid_carcinoma

c.131A>C; p.K44T;

large_intestine; coloncarcinoma; adenocarcinoma

c.443C>G; p.A148G;

large_intestine; coloncarcinoma; adenocarcinoma

c.378G>A; p.A126A;

large_intestine; rectumcarcinoma; adenocarcinoma

c.584A>G; p.E195G;

endometriumcarcinoma; endometrioid_carcinoma

c.253A>G; p.T85A;

endometriumcarcinoma; endometrioid_carcinoma

c.296+1G>A; p.?; 13:29935343-29935343

endometriumcarcinoma; endometrioid_carcinoma

c.488G>A; p.R163Q;

endometriumcarcinoma; endometrioid_carcinoma

c.378G>A; p.A126A;

large_intestine; coloncarcinoma; adenocarcinoma

c.333A>G; p.P111P;

endometriumcarcinoma; endometrioid_carcinoma

c.328C>T; p.R110C;

endometriumcarcinoma; endometrioid_carcinoma

c.120G>C; p.E40D;

breastcarcinoma

c.597G>T; p.E199D;

endometriumcarcinoma; endometrioid_carcinoma

c.242C>T; p.P81L;

skinmalignant_melanoma

c.297-3delt; p.?;

stomachadenocarcinoma


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