Pediatric cancer gene database (Pedican) Home
Pedican
Pediatric cancer database
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

6390

Name

SDHB

Synonym

IP|PGL4|SDH|SDH1|SDH2|SDHIP;succinate dehydrogenase complex, subunit B, iron sulfur (Ip);SDHB;succinate dehydrogenase complex, subunit B, iron sulfur (Ip)

Definition

iron-sulfur subunit of complex II|succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial

Position

1p36.1-p35

Gene Type

protein-coding

Pathways and Diseases

Pathway

Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins.;Reactome;REACT:6305

Pathway

Pyruvate metabolism and Citric Acid (TCA) cycle;Reactome;REACT:1046

Pathway

Citrate cycle (TCA cycle);KEGG PATHWAY;hsa00020

Pathway

Metabolic pathways;KEGG PATHWAY;hsa01100

Pathway

Oxidative phosphorylation;KEGG PATHWAY;hsa00190

Pathway

TCA cycle variation III (eukaryotic);BioCyc;PWY-5690

Pathway

Alzheimer's disease;KEGG PATHWAY;hsa05010

Pathway

Huntington's disease;KEGG PATHWAY;hsa05016

Pathway

Parkinson's disease;KEGG PATHWAY;hsa05012

Disease

Cowden-like syndrome;OMIM

Disease

extra-adrenal and/or malignant phaeochromocytomas;GAD

Disease

Paraganglioma, familial chromaffin, 4;OMIM

Disease

prolonged survival associated;GAD

Disease

pheochromocytomas;GAD

Disease

paragangliomas;GAD

Disease

head and neck cancer;GAD

Disease

Paraganglioma and gastric stromal sarcoma;OMIM

Disease

CANCER;GAD

Disease

Cancer;FunDO

Disease

paragangliomas, head and neck;GAD

Disease

Pheochromocytoma;OMIM

Disease

DEVELOPMENTAL;GAD

Disease

height;GAD

External Links

Links to Entrez Gene

6390

Links to all GeneRIF Items

6390

Links to iHOP

6390

Sequence Information

Nucleotide Sequence

>6390 : length: 843
atggcggcggtggtcgccctctccttgaggcgccggttgccggccacaacccttggcgga
gcctgcctgcaggcctcccgaggagcccagacagctgcagccacagctccccgtatcaag
aaatttgccatctatcgatgggacccagacaaggctggagacaaacctcatatgcagact
tatgaagttgaccttaataaatgtggccccatggtattggatgctttaatcaagattaag
aatgaagttgactctactttgaccttccgaagatcatgcagagaaggcatctgtggctct
tgtgcaatgaacatcaatggaggcaacactctagcttgcacccgaaggattgacaccaac
ctcaataaggtctcaaaaatctaccctcttccacacatgtatgtgataaaggatcttgtt
cccgatttgagcaacttctatgcacagtacaaatccattgagccttatttgaagaagaag
gatgaatctcaggaaggcaagcagcagtatctgcagtccatagaagagcgtgagaaactg
gacgggctctacgagtgcattctctgtgcctgctgtagcaccagctgccccagctactgg
tggaacggagacaaatatctggggcctgcagttcttatgcaggcctatcgctggatgatt
gactccagagatgacttcacagaggagcgcctggccaagctgcaggacccattctctcta
taccgctgccacaccatcatgaactgcacaaggacctgtcctaagggtctgaatccaggg
aaagctattgcagagatcaagaaaatgatggcaacctataaggagaagaaagcttcagtt
taa

Protein Sequence

>6390 : length: 280
MAAVVALSLRRRLPATTLGGACLQASRGAQTAAATAPRIKKFAIYRWDPDKAGDKPHMQT
YEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTN
LNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEEREKL
DGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSL
YRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEKKASV



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