| Gene ID | 6470 |
| Symbol | SHMT1 |
| Synonymous | CSHMT|SHMT |
| Full name | serine hydroxymethyltransferase 1 (soluble) |
| Gene description | cytoplasmic serine hydroxymethyltransferase|glycine hydroxymethyltransferase|serine hydroxymethyltransferase, cytosolic|serine methylase |
| Cytoband | 17p11.2 |
| Gene type | protein-coding |
| Synonymous | MIM:182144; HGNC:HGNC:10850; Ensembl:ENSG00000176974; HPRD:01643; Vega:OTTHUMG00000059094 |
Pathways and Diseases | Detail |
|---|---|
Pathway | Metabolism of folate and pterines;PID Reactome;501009 |
Pathway | Cyanoamino acid metabolism;KEGG PATHWAY;hsa00460 |
Pathway | Serine glycine biosynthesis;PANTHER;P02776 |
Pathway | Validated targets of C-MYC transcriptional activation;PID Curated;200045 |
Pathway | Glycine, serine and threonine metabolism;KEGG PATHWAY;hsa00260 |
Pathway | One carbon pool by folate;KEGG PATHWAY;hsa00670 |
Pathway | Metabolic pathways;KEGG PATHWAY;hsa01100 |
Pathway | Carnitine synthesis;PID Reactome;500784 |
Pathway | Metabolism of amino acids and derivatives;Reactome;REACT:13 |
Pathway | Metabolism of vitamins and cofactors;Reactome;REACT:11193 |
Pathway | folate polyglutamylation I;BioCyc;PWY-2161 |
Pathway | glycine biosynthesis I;BioCyc;GLYSYN-PWY |
Pathway | superpathway of serine and glycine biosynthesis I;BioCyc;SER-GLYSYN-PWY |
Pathway | glycine betaine degradation;BioCyc;PWY-3661 |
Pathway | folate transformations;BioCyc;PWY-2201 |
Disease | REPRODUCTION;GAD |
Disease | esophageal cancer;GAD |
Disease | Drug Hypersensitivity;GAD |
Disease | preterm delivery small-for-gestational age;GAD |
Disease | CANCER;GAD |
Disease | Cancer;FunDO |
Disease | METABOLIC;GAD |
Disease | esophageal cancer gastric cardiac cancer;GAD |
Sequence Information | |
|---|---|
Nucleotide Sequence | >6470 : length: 2553 CGGGGGCGGGGCCAAGCCCAAGCCTGGCGCGCAGAGTGCACCTTCCTGAGCTCGAGCGGTCCAGCGCCAAGTTCGGGGTTTGGGGTTGGAGCGGCTGGTCACGTGGCTGGCCCGCGGCGG TGCGCGGGGCGTTGGGTCAGCGGGTCTGGGACTGGTGGCACCGGCGGCGGCGTAGGACGGAGGCGTCGCTAGGCAGCTTCGAACCAGTGCAATGACGATGCCAGTCAACGGGGCCCACAA GGATGCTGACCTGTGGTCCTCACATGACAAGATGCTGGCACAACCCCTCAAAGACAGTGATGTTGAGGTTTACAACATCATTAAGAAGGAGAGTAACCGGCAGAGGGTTGGATTGGAGCT GATTGCCTCGGAGAATTTCGCCAGCCGAGCAGTTTTGGAGGCCCTAGGCTCTTGCTTAAATAACAAATACTCTGAGGGGTACCCGGGCCAGAGATACTATGGCGGGACTGAGTTTATTGA TGAACTGGAGACCCTCTGTCAGAAGCGAGCCCTGCAGGCCTATAAGCTGGACCCACAGTGCTGGGGGGTCAACGTCCAGCCCTACTCAGGCTCCCCTGCAAACTTTGCTGTGTACACTGC CCTGGTGGAACCCCATGGGCGCATCATGGGCCTGGACCTTCCGGATGGGGGCCACCTGACCCATGGGTTCATGACAGACAAGAAGAAAATCTCTGCCACGTCCATCTTCTTTGAATCTAT GCCCTACAAGGTGAACCCAGATACTGGCTACATCAACTATGACCAGCTGGAGGAGAACGCACGCCTCTTCCACCCGAAGCTGATCATCGCAGGAACCAGCTGCTACTCCCGAAACCTGGA ATATGCCCGGCTACGGAAGATTGCAGATGAGAACGGGGCGTATCTCATGGCGGACATGGCTCACATCAGCGGGCTGGTGGCGGCTGGCGTGGTGCCCTCCCCATTTGAACACTGCCATGT GGTGACCACCACCACTCACAAGACCCTGCGAGGCTGCCGAGCTGGCATGATCTTCTACAGGAAAGGAGTGAAAAGTGTGGATCCCAAGACTGGCAAAGAGATTCTGTACAACCTGGAGTC TCTTATCAATTCTGCTGTGTTCCCTGGCCTGCAGGGAGGTCCCCACAACCACGCCATTGCTGGGGTTGCTGTGGCACTGAAGCAAGCTATGACTCTGGAATTTAAAGTTTATCAACACCA GGTGGTGGCCAACTGCAGGGCTCTGTCTGAGGCCCTGACGGAGCTGGGCTACAAAATAGTCACAGGTGGTTCTGACAACCATTTGATCCTTGTGGATCTCCGTTCCAAAGGCACAGATGG TGGAAGGGCTGAGAAGGTGCTAGAAGCCTGTTCTATTGCCTGCAACAAGAACACCTGTCCAGGTGACAGAAGCGCTCTGCGGCCCAGTGGACTGCGGCTGGGGACCCCAGCACTGACGTC CCGTGGACTTTTGGAAAAAGACTTCCAAAAAGTAGCCCACTTTATTCACAGAGGGATAGAGCTGACCCTGCAGATCCAGAGCGACACTGGTGTCAGAGCCACCCTGAAAGAGTTCAAGGA GAGACTGGCAGGGGATAAGTACCAGGCGGCCGTGCAGGCTCTCCGGGAGGAGGTTGAGAGCTTCGCCTCTCTCTTCCCTCTGCCTGGCCTGCCTGACTTCTAAAGGAGCGGGCCCACTCT GGACCCACCTGGCGCCACAGAGGAAGCTGCCTGCCGGAGGACCCCCACCTGAGAGATGGATGAGCTGCTCCAAAGGGGAACTGTTGACACTCGGGCCCTTTGAGGGGGTTTCTTTTGGAC TTTTTTCATGTTTTCTTCACAAATCAAAATTTGTTTAAGTCTCATTGTTAGTAATTCTGGGACAGGTTATTAAAGGATTTAAATTTGAACCTGGCTTTCTCACAGCTGGACATAATTCTA GGAAAATAAAATACTATGTCGCCACTTGGTCATAATCATTTAGATGGTGGTGTAGGGCAAAGCTGTTAGAAAGATTGTAGCGTTTTACTCTCCCTGGGCTTTCCTCCGCCTTGCTGCAAC AGAGAGGAAATGCCCATGTCCACAGCTTGTACACACTGCCCCCTCACTATCTTGTTATCCAGTGGCATGCCAAAGGAGAACTGAATTAGCTTCTGAGGCTTCTGCTGTAAATCAGAAGTG TATGTTAGTCAAGAGTAAACAAGATGCACCCAGTATGGTGGGAGGGTTTTGCTGTCAGTAGCTCAAAGTATGGTGTAGAAATGGCCTCCTCCCTCCATCCTGGGAAGTCCCAGTCCCATC CTGGTGTGAGAATCAACCAGGCTTTCCTGCTCCACCTGAGATAACCAACTCCCTCCCGTAATCAGGAAGCCAAATGTCACCTTCCCAAAGAAATTTTATTTTCACGTAGCTGAAGTGCAA AACATAGATGACCATTTTTAATAAGCACAATCAAATTTTTAACCACAGAATGTCTACAAGAATTATAGCTTTAAAAAATACAACCAATTTTTATATTTCAAAAATATTTGAACTCAAATA AATTAATTTCTTAAAAAGTACACTTCTCATACT |
Protein Sequence | >6470 : length: 483 MTMPVNGAHKDADLWSSHDKMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSG SPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLIIAGTSCYSRNLEYARLRKIADENGAYLMADMAHISGLVAAGV VPSPFEHCHVVTTTTHKTLRGCRAGMIFYRKGVKSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSDNHLIL VDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVRATLKEFKERLAGDKYQAAVQALREEVESFASLFPLPGL PDF |