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Cancer metastasis database

Annotation category 5

Gene information

Gene ID 5155
Symbol

PDGFB

Synonymous

IBGC5|PDGF-2|PDGF2|SIS|SSV|c-sis

Full name

platelet-derived growth factor beta polypeptide

Gene description

PDGF subunit B|PDGF, B chain|becaplermin|platelet-derived growth factor 2|platelet-derived growth factor B chain|platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog)|platelet-derived growth factor subunit B|plate

Cytoband

22q13.1

Gene type

protein-coding

Synonymous

MIM:190040; HGNC:HGNC:8800; Ensembl:ENSG00000100311; HPRD:01815; Vega:OTTHUMG00000151029

Pathway and disease

Pathways and Diseases

Detail

Pathway

Melanoma;KEGG PATHWAY;hsa05218

Pathway

Glioma;KEGG PATHWAY;hsa05214

Pathway

Gap junction;KEGG PATHWAY;hsa04540

Pathway

Cytokine-cytokine receptor interaction;KEGG PATHWAY;hsa04060

Pathway

Focal adhesion;KEGG PATHWAY;hsa04510

Pathway

transcriptional activation of dbpb from mrna;PID BioCarta;100190

Pathway

Regulation of actin cytoskeleton;KEGG PATHWAY;hsa04810

Pathway

Hemostasis;Reactome;REACT:604

Pathway

MAPK signaling pathway;KEGG PATHWAY;hsa04010

Pathway

PDGF signaling pathway;PANTHER;P00047

Pathway

Prostate cancer;KEGG PATHWAY;hsa05215

Pathway

Signaling by PDGF;Reactome;REACT:16888

Pathway

Angiogenesis;PANTHER;P00005

Pathway

PDGFR-beta signaling pathway;PID Curated;200127

Pathway

Pathways in cancer;KEGG PATHWAY;hsa05200

Pathway

Renal cell carcinoma;KEGG PATHWAY;hsa05211

Disease

Cancers of the nervous system;KEGG DISEASE

Disease

Cancers;KEGG DISEASE

Disease

Giant-cell fibroblastoma;OMIM

Disease

Cancers of the lung and pleura;KEGG DISEASE

Disease

Systemic scleroderma;FunDO

Disease

Glioma;KEGG DISEASE;H00042

Disease

Bone marrow disease;FunDO

Disease

Cancer;FunDO

Disease

Meningioma, SIS-related;OMIM

Disease

Dermatofibrosarcoma protuberans;OMIM

Disease

Malignant pleural mesothelioma;KEGG DISEASE;H00015

Disease

Atherosclerosis;FunDO

Sequence Information

Nucleotide Sequence

>5155 : length: 3393
CCTGCCTGCCTCCCTGCGCACCCGCAGCCTCCCCCGCTGCCTCCCTAGGGCTCCCCTCCGGCCGCCAGCGCCCATTTTTCATTCCCTAGATAGAGATACTTTGCGCGCACACACATACAT
ACGCGCGCAAAAAGGAAAAAAAAAAAAAAAAGCCCACCCTCCAGCCTCGCTGCAAAGAGAAAACCGGAGCAGCCGCAGCTCGCAGCTCGCAGCTCGCAGCCCGCAGCCCGCAGAGGACGC
CCAGAGCGGCGAGCGGGCGGGCAGACGGACCGACGGACTCGCGCCGCGTCCACCTGTCGGCCGGGCCCAGCCGAGCGCGCAGCGGGCACGCCGCGCGCGCGGAGCAGCCGTGCCCGCCGC
CCGGGCCCCGCGCCAGGGCGCACACGCTCCCGCCCCCCTACCCGGCCCGGGCGGGAGTTTGCACCTCTCCCTGCCCGGGTGCTCGAGCTGCCGTTGCAAAGCCAACTTTGGAAAAAGTTT
TTTGGGGGAGACTTGGGCCTTGAGGTGCCCAGCTCCGCGCTTTCCGATTTTGGGGGCCTTTCCAGAAAATGTTGCAAAAAAGCTAAGCCGGCGGGCAGAGGAAAACGCCTGTAGCCGGCG
AGTGAAGACGAACCATCGACTGCCGTGTTCCTTTTCCTCTTGGAGGTTGGAGTCCCCTGGGCGCCCCCACACGGCTAGACGCCTCGGCTGGTTCGCGACGCAGCCCCCCGGCCGTGGATG
CTCACTCGGGCTCGGGATCCGCCCAGGTAGCGGCCTCGGACCCAGGTCCTGCGCCCAGGTCCTCCCCTGCCCCCCAGCGACGGAGCCGGGGCCGGGGGCGGCGGCGCCCGGGGGCCATGC
GGGTGAGCCGCGGCTGCAGAGGCCTGAGCGCCTGATCGCCGCGGACCCGAGCCGAGCCCACCCCCCTCCCCAGCCCCCCACCCTGGCCGCGGGGGCGGCGCGCTCGATCTACGCGTCCGG
GGCCCCGCGGGGCCGGGCCCGGAGTCGGCATGAATCGCTGCTGGGCGCTCTTCCTGTCTCTCTGCTGCTACCTGCGTCTGGTCAGCGCCGAGGGGGACCCCATTCCCGAGGAGCTTTATG
AGATGCTGAGTGACCACTCGATCCGCTCCTTTGATGATCTCCAACGCCTGCTGCACGGAGACCCCGGAGAGGAAGATGGGGCCGAGTTGGACCTGAACATGACCCGCTCCCACTCTGGAG
GCGAGCTGGAGAGCTTGGCTCGTGGAAGAAGGAGCCTGGGTTCCCTGACCATTGCTGAGCCGGCCATGATCGCCGAGTGCAAGACGCGCACCGAGGTGTTCGAGATCTCCCGGCGCCTCA
TAGACCGCACCAACGCCAACTTCCTGGTGTGGCCGCCCTGTGTGGAGGTGCAGCGCTGCTCCGGCTGCTGCAACAACCGCAACGTGCAGTGCCGCCCCACCCAGGTGCAGCTGCGACCTG
TCCAGGTGAGAAAGATCGAGATTGTGCGGAAGAAGCCAATCTTTAAGAAGGCCACGGTGACGCTGGAAGACCACCTGGCATGCAAGTGTGAGACAGTGGCAGCTGCACGGCCTGTGACCC
GAAGCCCGGGGGGTTCCCAGGAGCAGCGAGCCAAAACGCCCCAAACTCGGGTGACCATTCGGACGGTGCGAGTCCGCCGGCCCCCCAAGGGCAAGCACCGGAAATTCAAGCACACGCATG
ACAAGACGGCACTGAAGGAGACCCTTGGAGCCTAGGGGCATCGGCAGGAGAGTGTGTGGGCAGGGTTATTTAATATGGTATTTGCTGTATTGCCCCCATGGGGTCCTTGGAGTGATAATA
TTGTTTCCCTCGTCCGTCTGTCTCGATGCCTGATTCGGACGGCCAATGGTGCTTCCCCCACCCCTCCACGTGTCCGTCCACCCTTCCATCAGCGGGTCTCCTCCCAGCGGCCTCCGGCGT
CTTGCCCAGCAGCTCAAGAAGAAAAAGAAGGACTGAACTCCATCGCCATCTTCTTCCCTTAACTCCAAGAACTTGGGATAAGAGTGTGAGAGAGACTGATGGGGTCGCTCTTTGGGGGAA
ACGGGCTCCTTCCCCTGCACCTGGCCTGGGCCACACCTGAGCGCTGTGGACTGTCCTGAGGAGCCCTGAGGACCTCTCAGCATAGCCTGCCTGATCCCTGAACCCCTGGCCAGCTCTGAG
GGGAGGCACCTCCAGGCAGGCCAGGCTGCCTCGGACTCCATGGCTAAGACCACAGACGGGCACACAGACTGGAGAAAACCCCTCCCACGGTGCCCAAACACCAGTCACCTCGTCTCCCTG
GTGCCTCTGTGCACAGTGGCTTCTTTTCGTTTTCGTTTTGAAGACGTGGACTCCTCTTGGTGGGTGTGGCCAGCACACCAAGTGGCTGGGTGCCCTCTCAGGTGGGTTAGAGATGGAGTT
TGCTGTTGAGGTGGCTGTAGATGGTGACCTGGGTATCCCCTGCCTCCTGCCACCCCTTCCTCCCCACACTCCACTCTGATTCACCTCTTCCTCTGGTTCCTTTCATCTCTCTACCTCCAC
CCTGCATTTTCCTCTTGTCCTGGCCCTTCAGTCTGCTCCACCAAGGGGCTCTTGAACCCCTTATTAAGGCCCCAGATGATCCCAGTCACTCCTCTCTAGGGCAGAAGACTAGAGGCCAGG
GCAGCAAGGGACCTGCTCATCATATTCCAACCCAGCCACGACTGCCATGTAAGGTTGTGCAGGGTGTGTACTGCACAAGGACATTGTATGCAGGGAGCACTGTTCACATCATAGATAAAG
CTGATTTGTATATTTATTATGACAATTTCTGGCAGATGTAGGTAAAGAGGAAAAGGATCCTTTTCCTAATTCACACAAAGACTCCTTGTGGACTGGCTGTGCCCCTGATGCAGCCTGTGG
CTTGGAGTGGCCAAATAGGAGGGAGACTGTGGTAGGGGCAGGGAGGCAACACTGCTGTCCACATGACCTCCATTTCCCAAAGTCCTCTGCTCCAGCAACTGCCCTTCCAGGTGGGTGTGG
GACACCTGGGAGAAGGTCTCCAAGGGAGGGTGCAGCCCTCTTGCCCGCACCCCTCCCTGCTTGCACACTTCCCCATCTTTGATCCTTCTGAGCTCCACCTCTGGTGGCTCCTCCTAGGAA
ACCAGCTCGTGGGCTGGGAATGGGGGAGAGAAGGGAAAAGATCCCCAAGACCCCCTGGGGTGGGATCTGAGCTCCCACCTCCCTTCCCACCTACTGCACTTTCCCCCTTCCCGCCTTCCA
AAACCTGCTTCCTTCAGTTTGTAAAGTCGGTGATTATATTTTTGGGGGCTTTCCTTTTATTTTTTAAATGTAAAATTTATTTATATTCCGTATTTAAAGTTGTAAAAAAAAATAACCACA
AAACAAAACCAAATGAAAAAAAAAAAAAAAAAA

Protein Sequence

>5155 : length: 241
MNRCWALFLSLCCYLRLVSAEGDPIPEELYEMLSDHSIRSFDDLQRLLHGDPGEEDGAELDLNMTRSHSGGELESLARGRRSLGSLTIAEPAMIAECKTRTEVFEISRRLIDRTNANFLV
WPPCVEVQRCSGCCNNRNVQCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLACKCETVAAARPVTRSPGGSQEQRAKTPQTRVTIRTVRVRRPPKGKHRKFKHTHDKTALKETLG
A