| Gene ID | 3978 |
| Symbol | LIG1 |
| Synonymous | - |
| Full name | ligase I, DNA, ATP-dependent |
| Gene description | DNA ligase 1|polydeoxyribonucleotide synthase [ATP] 1 |
| Cytoband | 19q13.2-q13.3 |
| Gene type | protein-coding |
| Synonymous | MIM:126391; HGNC:HGNC:6598; Ensembl:ENSG00000105486; HPRD:00534; Vega:OTTHUMG00000183187 |
Pathways and Diseases | Detail |
|---|---|
Pathway | Early Phase of HIV Life Cycle;PID Reactome;500724 |
Pathway | Cell Cycle, Mitotic;Reactome;REACT:152 |
Pathway | Processive synthesis on the C-strand of the telomere;PID Reactome;500671 |
Pathway | DNA Repair;Reactome;REACT:216 |
Pathway | Base excision repair;KEGG PATHWAY;hsa03410 |
Pathway | Chromosome Maintenance;Reactome;REACT:22172 |
Pathway | Mismatch repair;KEGG PATHWAY;hsa03430 |
Pathway | DNA replication;KEGG PATHWAY;hsa03030 |
Pathway | Resolution of D-loop structures through Holliday junction intermediates;PID Reactome;500052 |
Pathway | DNA Replication;Reactome;REACT:383 |
Pathway | Processive synthesis on the lagging strand;PID Reactome;500900 |
Pathway | Resolution of AP sites via the multiple-nucleotide patch replacement pathway;PID Reactome;500033 |
Pathway | Removal of DNA patch containing abasic residue;PID Reactome;500945 |
Pathway | Nucleotide excision repair;KEGG PATHWAY;hsa03420 |
Pathway | Gap-filling DNA repair synthesis and ligation in GG-NER;PID Reactome;500062 |
Pathway | Gap-filling DNA repair synthesis and ligation in TC-NER;PID Reactome;500067 |
Disease | DNA ligase I deficiency;OMIM |
Disease | Immune system diseases;KEGG DISEASE |
Disease | head and neck cancer lung cancer;GAD |
Disease | DNA repair defect;KEGG DISEASE;H00094 |
Disease | CANCER;GAD |
Disease | Primary immunodeficiency;KEGG DISEASE |
Sequence Information | |
|---|---|
Nucleotide Sequence | >3978 : length: 4410 CTCGCGGGGGCGCTTCCACCGATTCCTCCTCTTTCCCTGCCAGTCACTCCTCAGACCCTCAGCCACACCCGCTCATCCAGGGCGAGGGAAAGCGCGGGCATTTTCCCAGTGTGCTCTGCG GGAGGGCTCGCCCCACTTCACCCCTTTTCCCGCCCTCCTCCCATTCGGGAGACTACGACTCCCAGTGTCCTCCGCGCGACGGCGGCGGTGCGGACGGTGCCCAGGTCCCGCCCCTAGGCT CTGCCCCGCCCCCGCCCGCAGACGTCTGCGCGCGAATGCCGTGGCGCGAACTTGGGACTGCAGAGGCGCGCCTGGCGGATCTGAGTGTGTTGCCCGGGCAGCGGCGCGCGGGACCAACGC AAGGAGCAGCTGACAGACGAAGAAAAGTGCTGGACAGGAAGGGAGAATTCTGACGCCAACATGCAGCGAAGTATCATGTCATTTTTCCACCCCAAGAAAGAGGGTAAAGCAAAGAAGCCT GAGAAGGAGGCATCCAATAGCAGCAGAGAGACGGAGCCCCCTCCAAAGGCGGCACTGAAGGAGTGGAATGGAGTGGTGTCCGAGAGTGACTCTCCGGTGAAGAGGCCAGGGAGGAAGGCG GCCCGGGTCCTGGGCAGCGAAGGGGAAGAGGAGGATGAAGCCCTTAGCCCTGCTAAAGGCCAGAAGCCTGCCCTGGACTGCTCACAGGTCTCCCCGCCCCGTCCTGCCACATCTCCTGAG AACAATGCTTCCCTCTCTGACACCTCTCCCATGGACAGTTCCCCATCAGGGATTCCGAAGCGTCGCACAGCTCGGAAGCAGCTCCCGAAACGGACCATTCAGGAAGTCCTGGAAGAGCAG AGTGAGGACGAGGACAGAGAAGCCAAGAGGAAGAAGGAGGAGGAAGAGGAGACCCCGAAAGAAAGCCTCACAGAGGCTGAAGTGGCCACAGAGAAGGAAGGAGAAGACGGGGACCAGCCC ACCACGCCTCCCAAGCCCCTAAAGACCTCCAAAGCAGAGACCCCGACGGAAAGCGTTTCAGAGCCTGAGGTGGCCACGAAGCAGGAACTGCAGGAGGAGGAAGAGCAGACCAAGCCTCCC CGCAGAGCTCCCAAGACGCTCAGCAGCTTCTTCACCCCCCGGAAGCCAGCAGTCAAAAAAGAAGTGAAGGAAGAGGAGCCAGGGGCTCCAGGAAAGGAGGGAGCTGCTGAGGGACCCCTG GATCCATCTGGTTACAATCCTGCCAAGAACAACTATCATCCCGTGGAAGATGCCTGCTGGAAACCGGGCCAGAAGGTTCCTTACCTGGCTGTGGCCCGGACGTTTGAGAAGATCGAGGAG GTGTCTGCTCGGCTCCGGATGGTGGAGACGCTGAGCAACTTGCTGCGCTCCGTGGTGGCCCTGTCGCCTCCAGACCTCCTCCCTGTCCTCTACCTCAGCCTCAACCACCTTGGGCCACCC CAGCAGGGCCTGGAGCTTGGCGTGGGTGATGGTGTCCTTCTCAAGGCAGTGGCCCAGGCCACAGGTCGGCAGCTGGAGTCCGTCCGGGCTGAGGCAGCCGAGAAAGGCGACGTGGGGCTG GTGGCCGAGAACAGCCGCAGCACCCAGAGGCTCATGCTGCCACCACCTCCGCTCACTGCCTCCGGGGTCTTCAGCAAGTTCCGCGACATCGCCAGGCTCACTGGCAGTGCTTCCACAGCC AAGAAGATAGACATCATCAAAGGCCTCTTTGTGGCCTGCCGCCACTCAGAAGCCCGGTTCATCGCTAGGTCCCTGAGCGGACGGCTGCGCCTTGGGCTGGCAGAGCAGTCGGTGCTGGCT GCCCTCTCCCAGGCAGTGAGCCTCACGCCCCCGGGCCAAGAATTCCCACCAGCCATGGTGGATGCTGGGAAGGGCAAGACAGCAGAGGCCAGAAAGACGTGGCTGGAGGAGCAAGGCATG ATCCTGAAGCAGACGTTCTGCGAGGTTCCCGACCTGGACCGAATTATCCCCGTGCTGCTGGAGCACGGCCTGGAACGTCTCCCGGAGCACTGCAAGCTGAGCCCAGGGATTCCCCTGAAA CCAATGTTGGCCCATCCCACCCGGGGCATCAGCGAGGTCCTGAAACGCTTTGAGGAGGCAGCTTTCACCTGCGAATACAAATATGACGGGCAGAGGGCACAGATCCACGCCCTGGAAGGC GGGGAGGTGAAGATCTTCAGCAGGAATCAGGAAGACAACACTGGGAAGTACCCGGACATCATCAGCCGCATCCCCAAGATTAAACTCCCATCGGTCACATCCTTCATCCTGGACACCGAA GCCGTGGCTTGGGACCGGGAAAAGAAGCAGATCCAGCCATTCCAAGTGCTCACCACCCGCAAACGCAAGGAGGTGGATGCGTCTGAGATCCAGGTGCAGGTGTGTTTGTACGCCTTCGAC CTCATCTACCTCAATGGAGAGTCCCTGGTACGTGAGCCCCTTTCCCGGCGCCGGCAGCTGCTCCGGGAGAACTTTGTGGAGACAGAGGGCGAGTTTGTCTTCGCCACCTCCCTGGACACC AAGGACATCGAGCAGATCGCCGAGTTCCTGGAGCAGTCAGTGAAAGACTCCTGCGAGGGGCTGATGGTGAAGACCCTGGATGTTGATGCCACCTACGAGATCGCCAAGAGATCGCACAAC TGGCTCAAGCTGAAGAAGGACTACCTTGATGGCGTGGGTGACACCCTGGACCTGGTGGTGATCGGCGCCTACCTGGGCCGGGGGAAGCGGGCCGGCCGGTACGGGGGCTTCCTGCTGGCC TCCTACGACGAGGACAGTGAGGAGCTGCAGGCCATATGCAAGGTCCTGGGGAACTGGGGCTGATGGCAGAAGCAGGAGGGAAGGAGATTAGACTCCCGGGGGTATTTCCTATTGCACAAC CCAGACCGAGGGGTGCTCACATCCCCCTGTGAAGGATCCGTTCTCCCCAGTTTTTATTTACTTTTTCTGGTTCTATGAGCAACTCTTGCTTCATATAGAAAAACAGGCTGGGATAGAAAG ATGTCAGGAATGTGTGTCAGTGAGAGATTGAGATTAGCTACAAATAGTGGTGGCTCACATAAGAAAAGAATTTTTTTGTTATGAAATGAGAAGTGTGGAGGGGGCAGTCTGATGCCATTA GGGATTCAGGTTCCTCCTCTCCCCACATTTTTTTTTGTCCCCACATTTTTTTTTTCTGCCATGTGCCTCTGGCCTCATCATCACAATGTGGCTGCAGGAGTTCCAGCCCTCATGGCCATG CCTGCTCCACGCACCAGGGAAGAGCAAAGGGGGTTGGACCCTGAGTCAGCCTCAGCCAGTGAACACCTTCTGCTCAAGTTCTGTTGCTCATCACTTTGCTCCATGGCTCACCCCTAGCTG CAAGGAATTCTGGGAAATGTAAAGTGATTTACTTTTTTTCAAGTTAAAGTTTTTCTTAAAGCTGTGCACATTTTGGACTAGATTTTCTTACGTATTTCCTATATTCCCCTCTCCAACAAA TTTGGGTCTTTTGCCACAGAAACAGAACAAAATATCACCTAGAATCGTACCACCCAGAGACACGCAGTAGTGACATTTGAGGGAATGTTTTATTTACATTTTTGCAAAGTTGTGATCCTT CTCTATGAGTAATTTTCTTTTCTGCCTTTTTACCCTGGAAGTACTTTGTTTTCAGTGTTGTATATGCCCTTAAGCAATATGGCAACAGGACCTGAATGCCCGCACAAGAGTTTTCAAGTG CTGTGCCCCATAGCACATAGTGCTGTGTCCTGAACCAGCTCCCCGTGGCTGTGTGGGGAAGTTGTTGCCGGCTTTGTTCTGATGGCTTGGAACTGGCTTCAGTGATGAGGAGCTGGAGGA GCATCACCAGAGCCTCAAGGCGCTGGTGCTGCCCAGCCCACGCCCTTACGTGCGGATAGATGGCGCTGTGATTCCCGACCACTGGCTGGACCCCAGCGCTGTGTGGGAGGTGAAGTGCGC TGACCTCTCCCTCTCTCCCATCTACCCTGCTGCGCGGGGCCTGGTGGATAGTGACAAGGGCATCTCCCTTCGCTTCCCTCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGC CACCACCAGTGCTCAGGTGGCCTGTTTGTACCGGAAGCAAAGTCAGATTCAGAACCAACAAGGCGAGGACTCAGGCTCTGACCCTGAAGATACCTACTAAGCCCTCGCCCTCCTAGGGCC TGGGTACAGGGCATGAGTTGGACGGACCCCAGGGTTATTATTGCCTTTGCTTTTTAGCAAATCTGCTGTGGCAGGCTGTGGATTTTGAGAGTCAGGGGAGGGGTGTGTGTGTGAGGGGGT GGCTTACTCCGGAGTCTGGGATTCATCCCGTCATTTCTTTCAATAAATAATTATTGGATAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAA |
Protein Sequence | >3978 : length: 919 MQRSIMSFFHPKKEGKAKKPEKEASNSSRETEPPPKAALKEWNGVVSESDSPVKRPGRKAARVLGSEGEEEDEALSPAKGQKPALDCSQVSPPRPATSPENNASLSDTSPMDSSPSGIPK RRTARKQLPKRTIQEVLEEQSEDEDREAKRKKEEEEEETPKESLTEAEVATEKEGEDGDQPTTPPKPLKTSKAETPTESVSEPEVATKQELQEEEEQTKPPRRAPKTLSSFFTPRKPAVK KEVKEEEPGAPGKEGAAEGPLDPSGYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQ ATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAM VDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPD IISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCE GLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVIPDHWLDPSA VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPEDTY |