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Cancer metastasis database

Annotation category 5

Gene information

Gene ID 3065
Symbol

HDAC1

Synonymous

GON-10|HD1|RPD3|RPD3L1

Full name

histone deacetylase 1

Gene description

reduced potassium dependency, yeast homolog-like 1

Cytoband

1p34

Gene type

protein-coding

Synonymous

MIM:601241; HGNC:HGNC:4852; Ensembl:ENSG00000116478; HPRD:03143; Vega:OTTHUMG00000007529

Pathway and disease

Pathways and Diseases

Detail

Pathway

Sumoylation by RanBP2 regulates transcriptional repression;PID Curated;200097

Pathway

Glucocorticoid receptor regulatory network;PID Curated;200077

Pathway

multi-step regulation of transcription by pitx2;PID BioCarta;100074

Pathway

Retinoic acid receptors-mediated signaling;PID Curated;200142

Pathway

Hedgehog signaling events mediated by Gli proteins;PID Curated;200147

Pathway

the prc2 complex sets long-term gene silencing through modification of histone tails;PID BioCarta;100063

Pathway

role of mef2d in t-cell apoptosis;PID BioCarta;100109

Pathway

Huntington's disease;KEGG PATHWAY;hsa05016

Pathway

cell cycle: g1/s check point;PID BioCarta;100160

Pathway

Presenilin action in Notch and Wnt signaling;PID Curated;200052

Pathway

Regulation of Telomerase;PID Curated;200072

Pathway

Chronic myeloid leukemia;KEGG PATHWAY;hsa05220

Pathway

Regulation of nuclear SMAD2/3 signaling;PID Curated;200002

Pathway

Notch-mediated HES/HEY network;PID Curated;200196

Pathway

Validated targets of C-MYC transcriptional repression;PID Curated;200171

Pathway

Signalling by NGF;Reactome;REACT:11061

Pathway

overview of telomerase protein component gene htert transcriptional regulation;PID BioCarta;100019

Pathway

Regulation of retinoblastoma protein;PID Curated;200191

Pathway

E2F transcription factor network;PID Curated;200027

Pathway

p53 pathway;PANTHER;P00059

Pathway

Regulation of Wnt-mediated beta catenin signaling and target gene transcription;PID Curated;200106

Pathway

wnt signaling pathway;PID BioCarta;100002

Pathway

Regulation of Androgen receptor activity;PID Curated;200102

Pathway

Wnt signaling pathway;PANTHER;P00057

Pathway

Cell cycle;KEGG PATHWAY;hsa04110

Pathway

Pathways in cancer;KEGG PATHWAY;hsa05200

Pathway

sumoylation by ranbp2 regulates transcriptional repression;PID BioCarta;100053

Pathway

downregulated of mta-3 in er-negative breast tumors;PID BioCarta;100102

Pathway

Signaling events mediated by HDAC Class I;PID Curated;200070

Pathway

Notch signaling pathway;KEGG PATHWAY;hsa04330

Pathway

mechanisms of transcriptional repression by dna methylation;PID BioCarta;100112

Pathway

control of gene expression by vitamin d receptor;PID BioCarta;100007

Pathway

Notch signaling pathway;PID Curated;200013

Pathway

inhibition of huntingtons disease neurodegeneration by histone deacetylase inhibitors;PID BioCarta;100140

Sequence Information

Nucleotide Sequence

>3065 : length: 2091
GAGCGGAGCCGCGGGCGGGAGGGCGGACGGACCGACTGACGGTAGGGACGGGAGGCGAGCAAGATGGCGCAGACGCAGGGCACCCGGAGGAAAGTCTGTTACTACTACGACGGGGATGTT
GGAAATTACTATTATGGACAAGGCCACCCAATGAAGCCTCACCGAATCCGCATGACTCATAATTTGCTGCTCAACTATGGTCTCTACCGAAAAATGGAAATCTATCGCCCTCACAAAGCC
AATGCTGAGGAGATGACCAAGTACCACAGCGATGACTACATTAAATTCTTGCGCTCCATCCGTCCAGATAACATGTCGGAGTACAGCAAGCAGATGCAGAGATTCAACGTTGGTGAGGAC
TGTCCAGTATTCGATGGCCTGTTTGAGTTCTGTCAGTTGTCTACTGGTGGTTCTGTGGCAAGTGCTGTGAAACTTAATAAGCAGCAGACGGACATCGCTGTGAATTGGGCTGGGGGCCTG
CACCATGCAAAGAAGTCCGAGGCATCTGGCTTCTGTTACGTCAATGATATCGTCTTGGCCATCCTGGAACTGCTAAAGTATCACCAGAGGGTGCTGTACATTGACATTGATATTCACCAT
GGTGACGGCGTGGAAGAGGCCTTCTACACCACGGACCGGGTCATGACTGTGTCCTTTCATAAGTATGGAGAGTACTTCCCAGGAACTGGGGACCTACGGGATATCGGGGCTGGCAAAGGC
AAGTATTATGCTGTTAACTACCCGCTCCGAGACGGGATTGATGACGAGTCCTATGAGGCCATTTTCAAGCCGGTCATGTCCAAAGTAATGGAGATGTTCCAGCCTAGTGCGGTGGTCTTA
CAGTGTGGCTCAGACTCCCTATCTGGGGATCGGTTAGGTTGCTTCAATCTAACTATCAAAGGACACGCCAAGTGTGTGGAATTTGTCAAGAGCTTTAACCTGCCTATGCTGATGCTGGGA
GGCGGTGGTTACACCATTCGTAACGTTGCCCGGTGCTGGACATATGAGACAGCTGTGGCCCTGGATACGGAGATCCCTAATGAGCTTCCATACAATGACTACTTTGAATACTTTGGACCA
GATTTCAAGCTCCACATCAGTCCTTCCAATATGACTAACCAGAACACGAATGAGTACCTGGAGAAGATCAAACAGCGACTGTTTGAGAACCTTAGAATGCTGCCGCACGCACCTGGGGTC
CAAATGCAGGCGATTCCTGAGGACGCCATCCCTGAGGAGAGTGGCGATGAGGACGAAGACGACCCTGACAAGCGCATCTCGATCTGCTCCTCTGACAAACGAATTGCCTGTGAGGAAGAG
TTCTCCGATTCTGAAGAGGAGGGAGAGGGGGGCCGCAAGAACTCTTCCAACTTCAAAAAAGCCAAGAGAGTCAAAACAGAGGATGAAAAAGAGAAAGACCCAGAGGAGAAGAAAGAAGTC
ACCGAAGAGGAGAAAACCAAGGAGGAGAAGCCAGAAGCCAAAGGGGTCAAGGAGGAGGTCAAGTTGGCCTGAATGGACCTCTCCAGCTCTGGCTTCCTGCTGAGTCCCTCACGTTTCTTC
CCCAACCCCTCAGATTTTATATTTTCTATTTCTCTGTGTATTTATATAAAAATTTATTAAATATAAATATCCCCAGGGACAGAAACCAAGGCCCCGAGCTCAGGGCAGCTGTGCTGGGTG
AGCTCTTCCAGGAGCCACCTTGCCACCCATTCTTCCCGTTCTTAACTTTGAACCATAAAGGGTGCCAGGTCTGGGTGAAAGGGATACTTTTATGCAACCATAAGACAAACTCCTGAAATG
CCAAGTGCCTGCTTAGTAGCTTTGGAAAGGTGCCCTTATTGAACATTCTAGAAGGGGTGGCTGGGTCTTCAAGGATCTCCTGTTTTTTTCAGGCTCCTAAAGTAACATCAGCCATTTTTA
GATTGGTTCTGTTTTCGTACCTTCCCACTGGCCTCAAGTGAGCCAAGAAACACTGCCTGCCCTCTGTCTGTCTTCTCCTAATTCTGCAGGTGGAGGTTGCTAGTCTAGTTTCCTTTTTGA
GATACTATTTTCATTTTTGTGAGCCTCTTTGTAATAAAATGGTACATTTCT

Protein Sequence

>3065 : length: 482
MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKRISICSSDKRIACEEEFSDSEEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGVKEEVK
LA