| Gene ID | 9150 |
| Symbol | CTDP1 |
| Synonymous | CCFDN|FCP1 |
| Full name | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 |
| Gene description | CTD of POLR2A, phosphatase of, subunit 1|RNA polymerase II subunit A C-terminal domain phosphatase|TFIIF-associating CTD phosphatase 1|serine phosphatase FCP1a|transcription factor IIF-associating CTD phosphatase 1 |
| Cytoband | 18q23 |
| Gene type | protein-coding |
| Synonymous | MIM:604927; HGNC:HGNC:2498; Ensembl:ENSG00000060069; HPRD:05377; Vega:OTTHUMG00000132920 |
Pathways and Diseases | Detail |
|---|---|
Pathway | Formation of HIV-1 elongation complex containing HIV-1 Tat;PID Reactome;500741 |
Pathway | RNA Polymerase II Transcription Elongation;PID Reactome;500566 |
Pathway | Formation of the Early Elongation Complex;PID Reactome;500567 |
Pathway | Transcription of the HIV genome;PID Reactome;500735 |
Pathway | HIV Infection;Reactome;REACT:6185 |
Pathway | Formation of the HIV-1 Early Elongation Complex;PID Reactome;500740 |
Pathway | Gene Expression;Reactome;REACT:71 |
Pathway | Formation of HIV-1 elongation complex in the absence of HIV-1 Tat;PID Reactome;500742 |
Pathway | Pausing and recovery of Tat-mediated HIV-1 elongation;PID Reactome;500990 |
Pathway | Pausing and recovery of HIV-1 elongation;PID Reactome;500871 |
Pathway | Pausing and recovery of elongation;Reactome;REACT:769 |
Pathway | Elongation arrest and recovery;PID Reactome;500956 |
Pathway | RNA Polymerase II Transcription;PID Reactome;500924 |
Pathway | HIV-1 elongation arrest and recovery;PID Reactome;501028 |
Pathway | Elongation arrest and recovery;Reactome;REACT:1892 |
Pathway | Formation of RNA Pol II elongation complex;PID Reactome;500568 |
Pathway | Transcription;Reactome;REACT:1788 |
Pathway | Tat-mediated HIV-1 elongation arrest and recovery;PID Reactome;500957 |
Pathway | Pausing and recovery of elongation;PID Reactome;500922 |
Pathway | RNA Polymerase II Pre-transcription Events;PID Reactome;500949 |
Pathway | Tat-mediated elongation of the HIV-1 transcript;PID Reactome;500917 |
Disease | Congenital cataracts, facial dysmorphism, and neuropathy;OMIM |
Sequence Information | |
|---|---|
Nucleotide Sequence | >9150 : length: 3765 GGAAGTCGGCGCGGGCTAGGCGACGGGTGGAAGCCGGTACCGAGAGGAACTACAGCGTCGCCGCCTGGGTTGTGTCGCCGCGGTAGGCGCTGCGCTCTGAGCGCAGCGCAGGCCCCGTAC CGACCGCCCGCCCGCCCTCTGTCCGCGATGGAGGTGCCGGCCGCGGGTCGCGTTCCTGCCGAGGGCGCCCCGACGGCGGCTGTGGCCGAGGTGCGCTGCCCGGGGCCCGCGCCGCTGCGC CTGCTGGAGTGGAGGGTGGCGGCGGGCGCGGCCGTGCGCATCGGCTCGGTGCTGGCCGTGTTCGAGGCCGCCGCCTCCGCGCAGTCCTCCGGGGCCTCTCAGTCCCGTGTAGCCTCCGGG GGCTGCGTGCGCCCCGCGCGGCCGGAACGCAGGCTGAGGTCGGAGCGCGCGGGCGTGGTGCGGGAGCTGTGCGCGCAGCCGGGCCAGGTGGTCGCCCCAGGAGCGGTTCTGGTGAGGTTG GAAGGATGCAGCCACCCGGTTGTCATGAAAGGCCTGTGTGCTGAATGTGGCCAAGACCTCACCCAGTTGCAGAGTAAGAACGGGAAGCAGCAGGTGCCGCTGTCCACGGCGACCGTGTCC ATGGTGCACAGCGTGCCGGAGTTGATGGTGAGCTCCGAGCAAGCTGAACAGCTGGGAAGAGAAGACCAGCAGCGACTGCACCGAAACCGGAAGCTGGTGCTCATGGTGGACTTGGACCAG ACGTTGATTCACACAACCGAGCAGCACTGTCAGCAGATGTCGAATAAAGGCATCTTTCACTTCCAGCTGGGCCGGGGTGAGCCCATGCTGCACACGCGCCTGCGTCCACACTGCAAGGAC TTCCTGGAGAAGATCGCCAAGCTGTACGAGCTGCACGTCTTCACCTTCGGCAGCCGGCTGTACGCACACACCATCGCAGGCTTTTTAGACCCCGAGAAGAAGCTTTTTTCTCACCGAATA TTATCAAGGGATGAATGTATTGACCCATTTTCTAAAACGGGAAACCTTAGAAATCTCTTTCCTTGTGGAGACTCAATGGTTTGCATTATTGATGATCGAGAAGATGTCTGGAAGTTTGCC CCCAATCTGATAACTGTGAAGAAATATGTATACTTCCAGGGCACGGGTGATATGAATGCGCCCCCTGGGTCCCGAGAATCTCAGACGAGAAAGAAAGTAAATCATTCTCGAGGCACTGAG GTCTCAGAGCCATCTCCGCCCGTGAGAGACCCTGAGGGGGTAACGCAGGCCCCTGGAGTGGAGCCCAGCAATGGCCTGGAGAAGCCTGCACGGGAGCTGAACGGCAGCGAGGCCGCCACC CCGCGGGACTCACCCCGCCCCGGGAAGCCAGACGAGAGGGACATCTGGCCCCCTGCCCAGGCCCCCACCAGCAGCCAAGAGCTGGCAGGCGCTCCTGAGCCCCAGGGATCCTGTGCGCAG GGTGGCCGGGTGGCACCGGGACAGCGGCCTGCCCAGGGTGCCACGGGCACTGACCTGGACTTTGACTTATCCAGCGACAGCGAGAGCAGCAGTGAGTCCGAGGGCACGAAGTCCTCCTCC TCCGCCTCTGATGGCGAAAGCGAGGGGAAAAGAGGCCGGCAGAAGCCGAAGGCTGCCCCAGAGGGAGCCGGGGCGCTGGCACAGGGCAGTTCCCTGGAGCCGGGGCGGCCTGCAGCACCG AGTCTCCCCGGAGAGGCCGAGCCTGGCGCGCATGCCCCGGACAAGGAGCCTGAGCTGGGTGGGCAGGAGGAGGGCGAGCGGGATGGCCTCTGCGGCCTGGGCAACGGCTGTGCCGACAGG AAGGAGGCGGAGACCGAGTCACAGAACAGCGAGCTGTCGGGGGTCACTGCGGGTGAGTCCCTGGACCAGAGCATGGAGGAGGAGGAGGAGGAGGACACGGATGAGGATGACCACCTCATC TACCTGGAGGAGATCCTGGTCCGTGTACACACTGACTACTATGCCAAGTATGACCGCTACCTCAACAAGGAGATCGAGGAGGCGCCGGACATCCGCAAGATCGTGCCGGAGCTCAAGAGC AAGGTGCTGGCAGACGTGGCCATAATTTTCAGTGGGCTACACCCGACAAACTTCCCGATAGAGAAGACGCGGGAGCATTACCACGCCACGGCGCTGGGAGCGAAGATCCTCACTCGGCTG GTGCTGAGCCCCGACGCCCCTGACAGGGCCACGCACCTGATCGCCGCGCGAGCTGGCACAGAGAAGGTGCTGCAGGCACAGGAGTGCGGACACCTGCACGTGGTCAACCCTGACTGGCTG TGGAGCTGCCTGGAGCGCTGGGACAAGGTGGAGGAGCAGCTCTTCCCGCTCAGGGACGATCACACCAAGGCACAGAGGGAGAACAGCCCTGCGGCCTTTCCCGACCGGGAGGGTGTGCCC CCCACCGCCTTGTTCCACCCGATGCCGGTTCTTCCCAAGGCCCAGCCTGGCCCCGAGGTTCGGATCTACGACTCCAACACGGGGAAGCTCATCAGGACGGGCGCCCGGGGGCCCCCAGCA CCCTCCAGCTCCCTACCCATCCGCCAGGAGCCCTCTTCCTTCAGAGCGGTTCCGCCACCCCAGCCGCAGATGTTTGGTGAAGAGCTGCCTGACGCTCAGGACGGAGAGCAGCCTGGCCCT TCTAGAAGAAAGCGACAGCCCAGTATGTCTGAGACAATGCCGCTGTACACTCTTTGTAAGGAGGATTTAGAGAGTATGGACAAAGAGGTGGACGACATCCTTGGAGAAGGCAGCGACGAC AGCGACAGCGAGAAGAGGAGGCCTGAGGAGCAGGAGGAGGAGCCCCAGCCCCGGAAGCCAGGGACCCGCAGGGAGCGGACGCTCGGGGCACCTGCGTCCAGCGAGAGGAGCGCGGCAGGG GGCCGGGGGCCCAGAGGCCACAAGAGGAAGCTGAATGAAGAGGACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCAACGAGGATGAGGGCAGCAGCTCCGAGGCCGACGAGATGGCCAAG GCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGC TGCTTTCTTCCCAAAGGACATGTATATTTGCAGAGCTCCACATACAGAAACACATTATTTTGCAGAAATAGGTGTTTTTAAGAAGTTTTACTACAGGAATGTCTACTTTTGTAAGTGACA GGTGTTAAAGGCCCAGGTGTGCTGTGCCAAAGAGCTCAGCAGAGGCTCACGTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGTGTTTTCCCCTTGTGTACCAGA GCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCC TGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGT CCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCTTTTATGTCTTGGAGACACCTGATGTAAAGTTTCTGTAAATCTATTTCATATCTGACCCACCAAACAGATTT CTCTTTAATAAAAATCCTTTTTGTAAGTTCTCTAAAAAAAAAAAA |
Protein Sequence | >9150 : length: 961 MEVPAAGRVPAEGAPTAAVAEVRCPGPAPLRLLEWRVAAGAAVRIGSVLAVFEAAASAQSSGASQSRVASGGCVRPARPERRLRSERAGVVRELCAQPGQVVAPGAVLVRLEGCSHPVVM KGLCAECGQDLTQLQSKNGKQQVPLSTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLY ELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYFQGTGDMNAPPGSRESQTRKKVNHSRGTEVSEPSPPVR DPEGVTQAPGVEPSNGLEKPARELNGSEAATPRDSPRPGKPDERDIWPPAQAPTSSQELAGAPEPQGSCAQGGRVAPGQRPAQGATGTDLDFDLSSDSESSSESEGTKSSSSASDGESEG KRGRQKPKAAPEGAGALAQGSSLEPGRPAAPSLPGEAEPGAHAPDKEPELGGQEEGERDGLCGLGNGCADRKEAETESQNSELSGVTAGESLDQSMEEEEEEDTDEDDHLIYLEEILVRV HTDYYAKYDRYLNKEIEEAPDIRKIVPELKSKVLADVAIIFSGLHPTNFPIEKTREHYHATALGAKILTRLVLSPDAPDRATHLIAARAGTEKVLQAQECGHLHVVNPDWLWSCLERWDK VEEQLFPLRDDHTKAQRENSPAAFPDREGVPPTALFHPMPVLPKAQPGPEVRIYDSNTGKLIRTGARGPPAPSSSLPIRQEPSSFRAVPPPQPQMFGEELPDAQDGEQPGPSRRKRQPSM SETMPLYTLCKEDLESMDKEVDDILGEGSDDSDSEKRRPEEQEEEPQPRKPGTRRERTLGAPASSERSAAGGRGPRGHKRKLNEEDAASESSRESSNEDEGSSSEADEMAKALEAELNDL M |