lung cancer gene and literature database Home
Cancer metastasis database

Annotation category 5

Gene information

Gene ID 6602
Symbol

SMARCD1

Synonymous

BAF60A|CRACD1|Rsc6p

Full name

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1

Gene description

60 kDa BRG-1/Brm-associated factor subunit A|BRG1-associated factor 60A|SWI/SNF complex 60 kDa subunit A|SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1|Swp73-like protein|chromatin remodeling complex BAF60A s

Cytoband

12q13-q14

Gene type

protein-coding

Synonymous

MIM:601735; HGNC:HGNC:11106; Ensembl:ENSG00000066117; HPRD:03438; Vega:OTTHUMG00000150194

Pathway and disease

Pathways and Diseases

Detail

Pathway

chromatin remodeling by hswi/snf atp-dependent complexes;PID BioCarta;100141

Pathway

Wnt signaling pathway;PANTHER;P00057

Pathway

Glucocorticoid receptor regulatory network;PID Curated;200077

Pathway

the information processing pathway at the ifn beta enhancer;PID BioCarta;100079

Sequence Information

Nucleotide Sequence

>6602 : length: 3431
AGCACGCCTTTTCCGCTAGTCGCCCCGCTCTATCCCATAGTCTCGCTGCCCTGAGCCTCCCGTGCCGGCCGGCCGGCCGGGGGAACAGGCGGGCGCTCGGGGGGCGCTCGGGGGGCGGGG
GGAGTTCCGGTTCCGGTTCTTTGTGCGGCTGCATCGGCGGCTCCGGGAAGATGGCGGCCCGGGCGGGTTTCCAGTCTGTGGCTCCAAGCGGCGGCGCCGGAGCCTCAGGAGGGGCGGGCG
CGGCTGCTGCCTTGGGCCCGGGCGGAACTCCGGGGCCTCCTGTGCGAATGGGCCCGGCTCCGGGTCAAGGGCTGTACCGCTCCCCGATGCCCGGAGCGGCCTATCCGAGACCAGGTATGT
TGCCAGGCAGCCGAATGACACCTCAGGGACCTTCCATGGGACCCCCTGGCTATGGGGGGAACCCTTCAGTCCGACCTGGCCTGGCCCAGTCAGGGATGGATCAGTCCCGCAAGAGACCTG
CCCCTCAGCAGATCCAGCAGGTCCAGCAGCAGGCGGTCCAAAATCGAAACCACAATGCAAAGAAAAAGAAGATGGCTGACAAAATTCTACCTCAAAGGATTCGTGAACTGGTACCAGAAT
CCCAGGCCTATATGGATCTCTTGGCTTTTGAAAGGAAACTGGACCAGACTATCATGAGGAAACGGCTAGATATCCAAGAGGCCTTGAAACGTCCCATCAAGCAAAAACGGAAGCTGCGAA
TTTTCATTTCTAACACTTTCAATCCGGCTAAGTCAGATGCCGAGGATGGGGAAGGGACGGTGGCTTCCTGGGAGCTTCGGGTAGAAGGACGGCTCCTGGAGGATTCAGCCTTGTCCAAAT
ATGATGCCACTAAACAAAAGAGGAAGTTCTCTTCCTTTTTTAAGTCCTTGGTGATTGAACTGGACAAAGACCTGTATGGGCCAGACAACCATCTGGTAGAATGGCACAGGACCGCCACTA
CCCAGGAGACCGATGGCTTTCAGGTGAAGCGGCCGGGAGACGTGAATGTACGGTGTACTGTCCTACTGATGCTGGATTACCAGCCTCCCCAGTTTAAATTAGACCCCCGCCTAGCTCGAC
TCCTGGGCATCCATACCCAGACTCGTCCAGTGATCATCCAAGCACTGTGGCAATATATTAAGACACATAAGCTCCAGGACCCTCACGAGCGGGAGTTTGTCATCTGTGACAAGTACCTGC
AGCAGATCTTTGAGTCTCAACGTATGAAGTTTTCAGAGATCCCTCAGCGGCTCCATGCCTTGCTTATGCCACCAGAACCTATCATCATTAATCATGTCATCAGTGTTGACCCGAATGATC
AGAAAAAGACAGCTTGTTATGACATTGATGTTGAAGTGGATGACACCTTGAAGACCCAGATGAATTCTTTTCTGCTGTCCACTGCCAGCCAACAGGAGATTGCTACTCTAGACAACAAGA
TCCATGAGACAATAGAAACCATCAACCAGCTGAAGACTCAGCGGGAGTTCATGCTGAGCTTTGCCAGAGACCCTCAGGGTTTCATCAATGACTGGCTTCAGTCCCAGTGCAGGGACCTCA
AGACAATGACTGATGTGGTGGGTAACCCAGAGGAGGAGCGCCGAGCTGAGTTCTACTTCCAGCCCTGGGCTCAGGAGGCTGTGTGCCGATACTTCTACTCCAAGGTGCAGCAGAGACGAC
AAGAATTAGAGCAAGCCCTGGGAATCCGGAATACATAGGGCCTCTCCCACAGCCCTGATTCGACTGCACCAATTCTTGATTTGGGCCCTGTGCTGCCTGCCTCATAGTATCTGCCTTGGT
CTTGCTTGGGGCGTTCCAGGGGATGCTGTTGGTTCAAGGACAACACCAGAATGAAGAGGGTCTCACAAGACACCTGTTATCCTCTTCTTTCACCCTATCTCTTCCCACCCCCAGCTTCCC
TTTGCCCCACAAAGTTCCCATGTGCCTGTACCCTCCCCTGGTCTACATAGGACCTCTAGATAGTGTTAGAGAGAGAACATGTAGTGGTAATGAGTGCTTGGAATGGATTGGGCCTCAGGC
CAGGTGGTCTTCAAGGGGACCAGCTAACTGATCCTGCCCTTCAGAGACCCAGGAGTTGGGAGCTTTCGCTCCTTCTCCAAGACTCAGGCCTGTGGGCACTCTATAAGCTAGTTGATCTTG
GCTCTCCTGATAACAGAATCCAATTTCCTTCCTTCCCTCCACAGGTTTGGAACAAACTCTCCCTTCACTTGTTGCCCTGTAGCACTACAGAAACCCTGGTTCTTGGGCTCCACTGAGCCC
CAGGTCAGTCCCCAGCCCTCTGGGTTGGCCTGCTGTCAGTGCTTCTCTCACTCCTTAGTTGGGGTCCACATCAGTATTGGAGTTTTGTTCTTTATTGCTCCCTCCCAGACACTCCCTGTG
GCTGCCCTTTGTGATTCCCTCAGATCTGCCCTAATCCCGGGCATTTGGGTGGGGGAATCTTGCCTTTCCCTTTCAGAGCCCCAGGGATCTCATCTGGGGAACTGTCATTGCCAGCAGAGG
CTGTTCCTTCCTGCTGTTTGGAGATGTGACTCATTCATTCACTCACTCCACCCTGCCTCTGCATCCCTTAATGGAGAAACGGGCCTAAAACCAAACGGGTAAAAAGCCCTGGGCCATCCC
TGTCTTCCTGTCCCTTGTCTGCCCAGTTGACACCTACTGGTGACTTCTAGGGCACTGAGGAGTGAAAGCGCCTAGGGCTGGAGAATAGCGCTGAGTTGGGTTTGTGACTCTTCCCTCTCC
CTGCCTCACAGGATTGTGACTCCCCAGCCCCTGCCCTCAAAGCTTCAGACCCCTCAGGTAGCAGCAGGACCTTGTGATCTTGGCCCCTTGGATCTGAGATGGTTTTTGCATCTTTCCAGG
AGAGCCTCACATTCTTCTTCCAGGTTGTATCACCCCCGAGTTAGCATATCCCAGGCTCGCAGACTCAACACAGCAAGGGTGGGAGACAGCTGGGCACAAAGGGGGAATTCCGTTCAGCAT
GGGCTCTAAACCCACAGAACTGACAAAGCCCCTGCTTCCCCACCCCCTCCTCAGGCTCCTGCGAGCACACCCCCACCCCCAAATCCCTCCCTGTTCTACACTGGGGACAGCAGAATTTTC
TCCCCGTCTTCCCCTTCCTGCCATTTTCCCTCCCTTGAAAGGTTGACACTGGACAACCTTGGGGCAGCTGAGCCCTGGCCGCCTCCTGGCTGGAACCATGAGAAGGAAGCTCAGTACTTC
CCACAGTGTCCCTGTTGATAACTGTTTTTATTAACTGAATTGTTTTTTTCATGGACCAAACTTTTTTTTGTACTGTCCCCTTATTGATGTTACCCAGTTTTAATAAAAGAATCTTCTGAA
GGATGGGTCCTCCTACCTACTGTGAGAGAGCTCTTCCCTGAGCTCTTCTTCCTTCAATACCATTAGCCAAA

Protein Sequence

>6602 : length: 515
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPRPGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT