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Cancer metastasis database

Annotation category 5

Gene information

Gene ID 6431
Symbol

SRSF6

Synonymous

B52|HEL-S-91|SFRS6|SRP55

Full name

serine/arginine-rich splicing factor 6

Gene description

SR splicing factor 6|epididymis secretory protein Li 91|pre-mRNA-splicing factor SRP55|splicing factor, arginine/serine-rich, 55 kDa

Cytoband

20q12-q13.1

Gene type

protein-coding

Synonymous

MIM:601944; HGNC:HGNC:10788; Ensembl:ENSG00000124193; HPRD:09054; Vega:OTTHUMG00000032502

Pathway and disease

Pathways and Diseases

Detail

Pathway

mRNA Splicing;PID Reactome;500995

Pathway

mRNA Splicing - Major Pathway;PID Reactome;500866

Pathway

mRNA Processing;Reactome;REACT:1675

Pathway

mRNA Splicing - Minor Pathway;PID Reactome;500656

Pathway

Spliceosome;KEGG PATHWAY;hsa03040

Pathway

Transport of Mature mRNA derived from an Intron-Containing Transcript;PID Reactome;500928

Pathway

Transcription;Reactome;REACT:1788

Pathway

Gene Expression;Reactome;REACT:71

Pathway

Post-Elongation Processing of the Transcript;Reactome;REACT:78

Pathway

mRNA 3'-end processing;PID Reactome;500105

Pathway

Cleavage of Growing Transcript in the Termination Region;PID Reactome;500570

Sequence Information

Nucleotide Sequence

>6431 : length: 4023
CATATAGCGAAAGCCTGGCGCGCGCGCGCGCCATTGTGTGGCTGGACTCGGCCGCCCCTGTGGTGTGAGGCGCGTGTTCGGGCTCTTGCCGTCCCCGCACCCGCACCGCGGTTACTGGCT
TGCGGTCCGCCGTTCGACAACCAGCCCTTGGGTCCCCGCCCGCCACGGACATGCCGCGCGTCTACATAGGACGCCTGAGCTACAACGTCCGGGAGAAGGACATCCAGCGCTTTTTCAGTG
GCTATGGCCGCCTCCTCGAAGTAGACCTCAAAAATGGGTACGGCTTCGTGGAGTTCGAGGACTCCCGCGACGCCGACGACGCCGTTTACGAGCTGAACGGCAAGGAGCTCTGCGGCGAGC
GCGTGATCGTAGAGCACGCCCGGGGCCCGCGTCGCGATCGCGACGGCTACAGCTACGGAAGCCGCATGACCAATGGGGCTGAGGCTGTGTCCACTGAGGCTAAGATGACTGCCTTTCCTG
ATTGGCCTTGGCTTTTCCATACATTGTGTGACCCTTGCCCTATGACCCTTTGGCTGACCTTACCGGAAGCCATGACGACAGCAGCCTTTTGCCATTAGACGCAGGGTGATGGTGAGGATT
CCAAGGGTTAGACAAAACTGGTTAATCTGAACTAGGTGACTGTTACCTTGCGTGTTTTGTGGCCAAACCACCACCAAAAACCTCACACTGTGATGTGGTGGAGGTGGATACAGCAGTCGG
AGAACATCTGGCAGAGACAAATACGGACCACCTGTTCGTACAGAATACAGGCTTATTGTAGAAAATCTTTCTAGTCGGTGCAGTTGGCAAGATTTAAAGGATTTTATGCGACAAGCAGGT
GAAGTAACCTATGCGGATGCCCACAAGGAACGAACAAATGAGGGTGTAATTGAGTTTCGCTCCTACTCTGACATGAAGCGTGCTTTGGACAAACTGGATGGCACAGAAATAAATGGCAGA
AATATTAGGCTTATTGAAGATAAGCCACGCACAAGCCATAGGCGATCTTACTCTGGAAGCAGATCCAGGTCTCGATCTAGAAGACGGTCACGAAGTAGGAGTCGCAGGAGCAGCCGCAGT
AGATCTCGAAGTATCTCAAAAAGTCGCTCCCGTTCCAGGTCGCGGAGCAAAGGTCGATCACGTTCTCGATCAAAAGGCAGGAAATCTAGATCAAAGAGCAAATCTAAGCCCAAGTCTGAT
CGGGGCTCCCATTCACATTCTCGAAGCAGATCTAAGGATGAGTATGAGAAATCTCGAAGCAGGTCTCGGTCCCGATCCCCTAAAGAAAATGGAAAGGGTGATATAAAGTCAAAATCCAGA
TCAAGGAGCCAGTCCCGTTCCAATTCGCCGCTACCTGTTCCACCCTCAAAGGCCCGTTCTGTGTCCCCTCCACCAAAAAGAGCTACTTCAAGATCCCGTTCTAGATCTCGCTCAAAGTCA
AGATCAAGGTCCAGGTCGAGTTCCAGAGATTAACTCAGAACTCCTTGTTTGCACATTATTATGGAACACTTTCCTACTTAGGCAGTTACTCTTCCATGTTTATACTTGGCCTCTTCTGCA
AGAGGAATCTCTTGAAAACAGGGGCACACAGAAATTTGATTTGTGGCCAAATTGGATGAAAAAGATGAGGCTCTAAGGAAATGGTGGCATGAAGACCCTCTCCCTTCTTTGTAGAATTAA
GATAACTTTGATTTTATAGCTTTTGAGCTAACGTAACTTTTGTAAAGATTAAGCTCATTTAGTGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTATTTCAGCAGGAT
CTGCTGGCAGGGTTTTTTTGTTTTATTTGTTTGCTTATTTTTAAATTAACTGTTTTGAGCTTTGAATACTTAAGGCTTTAGAGGGAGAACCCAATTTTCAATTATGTTGGCTTTTTATAA
AGCTTGAGTTATGTAAGATTTAAATAAAAGTTTGCTACCAAGATGATTGCCTTATTGAATAGGTCACTATTAAATTCCTTTAAATGTTGATATCTGCCATTTGTGGAAACAACGTAAATT
CTACTTAAGTGTAAACAAGGCAAGCCTCAGACCAGCAATAAATTACTCAGTTTGGATAACATTATTTTGTGCAGTTAATCAAATTTGCCAAAGTCTTTATCTGCCCCTTTAACAAGTTGA
GTAAAAATAAAAGGTATTTTTTAGTCAATGTGTTCCATGATTTTGCTTAAATTAATACTTTTAAGTAATGGAACTTTTTTCAAAGGCAAATTTAAACTATTTAAGAAATAGCTCCTAATA
CTTGGGATCTTGTTTAGAGAATCCACTTTCTGGAAGTTCTCAGCATAATTAGTGTTGAGAGTGGTTCAGTTGTCTTTAATGTTTGTCATGTGGAAATGGAAGTAGCCTCTTTTTGTTCTG
AAATTGAGTTTATTCAAAGTGTAAAAGCACATACTGCATTTTCTGCTGAAAGATCATTATGTTTAACAGGCACTTAATCTCAGTAAAGTCAGTTGCCAGTTAAGTTCCACCCAGTAGTCA
GTCCCCTTTGTAGTTAGTGGGATTATTTGATAATTGGTTAGATCATACTTGTAAATTTTAATGCTTTGTGTAATTGGTTTGAAAAACAGTGAAATGGGTAAACGCAAAACTTTTGTACTT
TATTACGAGTAAAGTGTAATGAGTACTGTGGAAACCAAATTTGAATACTGCAAATTTGTAGGAGTTACTAGGTTAGCAATTAGTCCATACATCCATAAGCCTGATGAGTTGAAATTGCAG
TTTGAGAAGTGAATTAACCTTACATCCCTTTGTTCAGATACCTTAAAAGTTACTTTATTTAAAAGCATTTATTAATCTTAGTCTGAAATCAAAATATAGATTAATTGGCTCAGCTTTAAT
ACCTTTCTAGGAGGTGTCACAATGTAGGGTACCAAGGGTTGGATTGTGATGGGGCATGGTCGTACACTGCTCATTGTGCCACAGGTGTGACTGGAAAGCATGATATTCTAGGGTTGGTTT
GTAGATTCAAATAATCCAGAAATATACCTAATAAGATTGAGTGAAAAATTTGAGTCAAATATCTAGGGCATTCACAGAGTAGCTGTGAGTTCTTGGTAATGTGAAAAAGGCCTTGTTTTT
CAGAAATTCCTGGGTTTCCTGTTAAAAAATCTTAAAGCCCAACCTTAGGAATATAGTGCCCCAAAAGGCGGATGCTTCTTCCATTATCTTATTTTCTTTGATACTTTATTTAATTAGATG
TTTATAAAGAAATGGGTTTATTTTTCCAGCATAAACCTCAGAATTTAAGGAAAGAAAATGATGTCTGTTGTTATAGTTCATTGTTTTGCCTACTCAGCAGAAGTGATGACTCTTAAAAAT
TGGCTTTGACCAAAGTTCTCTTGTTTTCAGGGAAAGAACATAAAAGCTTTTTGAACTACAGCCTTTTTAAAAGAGGGATGGGAGGATATTACAGTAAGAAATTAGGCTTTCTAAAAGTAT
GAAACATCCTTCAACTGGGCTCTCTTGTTAATAGGACATCATATGGTAATAGACTGGTTTGACTATATTGTTAGCTGCCACAGTAAGCAGGTCATTGTATAGGTAAATGCCTGCACCCAT
AATTTTCTAGTAATAGCCACGACCAATTTATTAACAGTCAGGGCCTATCCTTGCCTGTAGTTCTCAGTCACTGGATGCACAAAATCACTGTGTAACATTGGCTCACTTGGTGAGCATAGG
GTTGACTGATAAAATGTTTAATTCCCTTGCTAGCTTGTGAGAAGAATGAGTTGATGACATGCTCCATACCAGTGGCTAGATGGAGTATTAAGGTGGAGCAGAAAAGAAGTGAGAACATCT
TGATTCCCCTTTCTTTTACTTGATGGTGTTTATGAACATGCCGTAGTGCCTTTATGGCCAGTTTGAGTCCTGCCTACTTTGACTTTTACGTTCCCATTCCTGTGTTACCACCTTCCTCCC
GATTTGTTCACCTATTTTGTGCTTTAAATCTCAATAAAATACTTACTGAGGGAAAAAAAAAAA

Protein Sequence

>6431 : length: 344
MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR
CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKG
RKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSSSRD