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Cancer metastasis database

Annotation category 5

Gene information

Gene ID 5133
Symbol

PDCD1

Synonymous

CD279|PD-1|PD1|SLEB2|hPD-1|hPD-l|hSLE1

Full name

programmed cell death 1

Gene description

programmed cell death protein 1|protein PD-1|systemic lupus erythematosus susceptibility 2

Cytoband

2q37.3

Gene type

protein-coding

Synonymous

MIM:600244; HGNC:HGNC:8760; Ensembl:ENSG00000188389; HPRD:02590; Vega:OTTHUMG00000151342

Pathway and disease

Pathways and Diseases

Detail

Pathway

Cell adhesion molecules (CAMs);KEGG PATHWAY;hsa04514

Pathway

PD-1 signaling;PID Reactome;500488

Pathway

T cell receptor signaling pathway;KEGG PATHWAY;hsa04660

Pathway

Signaling in Immune system;Reactome;REACT:6900

Disease

Lupus erythematosus;FunDO

Disease

Sicca syndrome;FunDO

Disease

Lupus vulgaris;FunDO

Disease

Hepatitis;FunDO

Disease

Bladder cancer;FunDO

Disease

Oral cancer;FunDO

Disease

Lupus Nephritis;GAD

Disease

ankylosing spondylitis;GAD

Disease

HIV infection;FunDO

Disease

Immunologic deficiency syndrome;FunDO

Disease

IMMUNE;GAD

Disease

Lupus Erythematosus, Systemic;GAD

Disease

Viremia;FunDO

Disease

lupus erythematosus;GAD

Disease

rheumatoid arthritis;GAD

Disease

Kidney disease;FunDO

Disease

systemic lupus erythematosus;GAD

Disease

Autoimmune disease;FunDO

Disease

Lung disease;FunDO

Disease

diabetes, type 1;GAD

Disease

Graves' disease;GAD

Disease

Systemic lupus erythematosus, susceptibility to, 2;OMIM

Disease

Systemic lupus erythematosus;KEGG DISEASE;H00080

Disease

multiple sclerosis;GAD

Disease

Immune system diseases;KEGG DISEASE

Disease

Allergies and autoimmune diseases;KEGG DISEASE

Disease

Hodgkin's disease;FunDO

Disease

Lupus;GAD

Disease

Arthritis;FunDO

Sequence Information

Nucleotide Sequence

>5133 : length: 2115
AGTTTCCCTTCCGCTCACCTCCGCCTGAGCAGTGGAGAAGGCGGCACTCTGGTGGGGCTGCTCCAGGCATGCAGATCCCACAGGCGCCCTGGCCAGTCGTCTGGGCGGTGCTACAACTGG
GCTGGCGGCCAGGATGGTTCTTAGACTCCCCAGACAGGCCCTGGAACCCCCCCACCTTCTCCCCAGCCCTGCTCGTGGTGACCGAAGGGGACAACGCCACCTTCACCTGCAGCTTCTCCA
ACACATCGGAGAGCTTCGTGCTAAACTGGTACCGCATGAGCCCCAGCAACCAGACGGACAAGCTGGCCGCCTTCCCCGAGGACCGCAGCCAGCCCGGCCAGGACTGCCGCTTCCGTGTCA
CACAACTGCCCAACGGGCGTGACTTCCACATGAGCGTGGTCAGGGCCCGGCGCAATGACAGCGGCACCTACCTCTGTGGGGCCATCTCCCTGGCCCCCAAGGCGCAGATCAAAGAGAGCC
TGCGGGCAGAGCTCAGGGTGACAGAGAGAAGGGCAGAAGTGCCCACAGCCCACCCCAGCCCCTCACCCAGGCCAGCCGGCCAGTTCCAAACCCTGGTGGTTGGTGTCGTGGGCGGCCTGC
TGGGCAGCCTGGTGCTGCTAGTCTGGGTCCTGGCCGTCATCTGCTCCCGGGCCGCACGAGGGACAATAGGAGCCAGGCGCACCGGCCAGCCCCTGAAGGAGGACCCCTCAGCCGTGCCTG
TGTTCTCTGTGGACTATGGGGAGCTGGATTTCCAGTGGCGAGAGAAGACCCCGGAGCCCCCCGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCACCATTGTCTTTCCTAGCGGAATGG
GCACCTCATCCCCCGCCCGCAGGGGCTCAGCTGACGGCCCTCGGAGTGCCCAGCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTTGGCCACCAGTGTTC
TGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCTGGGGGCGACCGGGGCTCCAGCCTG
CACCTGCACCAGGCACAGCCCCACCACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTCCCCTACAGGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCT
GCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCTGCGGCCCGGGGCTGAAGGCGCCGTGGCCCTGCCTGACGCCCCGGAGCCT
CCTGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCCCTGGCAGTGGCATCCCGAAACGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTAC
ATGGGGCTGGGGACTCCCCAGGAGTTATCTGCTCCCTGCAGGCCTAGAGAAGTTTCAGGGAAGGTCAGAAGAGCTCCTGGCTGTGGTGGGCAGGGCAGGAAACCCCTCCACCTTTACACA
TGCCCAGGCAGCACCTCAGGCCCTTTGTGGGGCAGGGAAGCTGAGGCAGTAAGCGGGCAGGCAGAGCTGGAGGCCTTTCAGGCCCAGCCAGCACTCTGGCCTCCTGCCGCCGCATTCCAC
CCCAGCCCCTCACACCACTCGGGAGAGGGACATCCTACGGTCCCAAGGTCAGGAGGGCAGGGCTGGGGTTGACTCAGGCCCCTCCCAGCTGTGGCCACCTGGGTGTTGGGAGGGCAGAAG
TGCAGGCACCTAGGGCCCCCCATGTGCCCACCCTGGGAGCTCTCCTTGGAACCCATTCCTGAAATTATTTAAAGGGGTTGGCCGGGCTCCCACCAGGGCCTGGGTGGGAAGGTACAGGCG
TTCCCCCGGGGCCTAGTACCCCCGCCGTGGCCTATCCACTCCTCACATCCACACACTGCACCCCCACTCCTGGGGCAGGGCCACCAGCATCCAGGCGGCCAGCAGGCACCTGAGTGGCTG
GGACAAGGGATCCCCCTTCCCTGTGGTTCTATTATATTATAATTATAATTAAATATGAGAGCATGCTAAGGAAAA

Protein Sequence

>5133 : length: 288
MQIPQAPWPVVWAVLQLGWRPGWFLDSPDRPWNPPTFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRNDSGT
YLCGAISLAPKAQIKESLRAELRVTERRAEVPTAHPSPSPRPAGQFQTLVVGVVGGLLGSLVLLVWVLAVICSRAARGTIGARRTGQPLKEDPSAVPVFSVDYGELDFQWREKTPEPPVP
CVPEQTEYATIVFPSGMGTSSPARRGSADGPRSAQPLRPEDGHCSWPL