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Cancer metastasis database

Annotation category 5

Gene information

Gene ID 389421
Symbol

LIN28B

Synonymous

CSDD2

Full name

lin-28 homolog B (C. elegans)

Gene description

Lin-28.2|lin-28B|protein lin-28 homolog B

Cytoband

6q21

Gene type

protein-coding

Synonymous

MIM:611044; HGNC:HGNC:32207; Ensembl:ENSG00000187772; HPRD:13366; Vega:OTTHUMG00000015290

Pathway and disease

Pathways and Diseases

Detail

Pathway

Validated targets of C-MYC transcriptional activation;PID Curated;200045

Disease

Height;NHGRI

Disease

REPRODUCTION;GAD

Disease

menarche and menopause (age at onset);GAD

Disease

Digit length ratio;NHGRI

Disease

Menarche and menopause (age at onset);NHGRI

Disease

Digit length ratio;GAD

Disease

Menarche (age at onset);NHGRI

Disease

menarche (age at onset);GAD

Disease

DEVELOPMENTAL;GAD

Disease

height;GAD

Disease

timing of puberty;GAD

Sequence Information

Nucleotide Sequence

>389421 : length: 5517
AATTGACAAAGTCACGTGTGCTCAGGGGGCCAGAAACTGGAGAGAGGAGAGAAAAAAATCAAAAGAAGGAAAGCACATTAGACCATGCGAGCTAAATTTGTGATCGCACAAAATCAAGAT
GTTAGATTGATGCAGAAGATCACTCCGTTCCAAAGGGAAAGTTTTCATCTCACGAGTTTGGAGCTGAGGGCCCGTGGGGCAACATGGCCGAAGGCGGGGCTAGCAAAGGTGGTGGAGAAG
AGCCCGGGAAGCTGCCGGAGCCGGCAGAGGAGGAATCCCAGGTTTTGCGCGGAACTGGCCACTGTAAGTGGTTCAATGTGCGCATGGGATTTGGATTCATCTCCATGATAAACCGAGAGG
GAAGCCCCTTGGATATTCCAGTCGATGTATTTGTACACCAAAGCAAACTATTCATGGAAGGATTTAGAAGCCTAAAAGAAGGAGAACCAGTGGAATTCACATTTAAAAAATCTTCCAAAG
GCCTTGAGTCAATACGGGTAACAGGACCTGGTGGGAGCCCCTGTTTAGGAAGTGAAAGAAGACCCAAAGGGAAGACACTACAGAAAAGAAAACCAAAGGGAGATAGATGCTACAACTGTG
GTGGCCTTGATCATCATGCTAAGGAATGTAGTCTACCTCCTCAGCCAAAGAAGTGCCATTACTGTCAGAGCATCATGCACATGGTGGCAAACTGCCCACATAAAAATGTTGCACAGCCAC
CCGCGAGTTCTCAGGGAAGACAGGAAGCAGAATCCCAGCCATGCACTTCAACTCTCCCTCGAGAAGTGGGAGGCGGGCATGGCTGTACATCACCACCGTTTCCTCAGGAGGCTAGGGCAG
AGATCTCAGAACGGTCAGGCAGGTCACCTCAAGAAGCTTCCTCCACGAAGTCATCTATAGCACCAGAAGAGCAAAGCAAAAAGGGGCCTTCAGTTCAAAAAAGGAAAAAGACATAACAGG
TCTTCTTCATATGTTCTTTCCTTTACCCGGTTGCAAAGTCTACCTCATGCAAGTATAGGGGAACAGTATTTCACAAGCAGTAGCTGACCTGGGATTTTAACTACTATTGGGGAACTGTGA
ATTTTTTAAACAGACAAATCACTCTAAGCAAATTACATTTGAGCAGGGTGTCATGTTTTATGTTAATTCAGAGAATAAGATACTATGTCTGTCAATATGTGCATGTGTGAGAGGGAGAGA
GCCTGAGTCTGTGTGTGTACATGAGGATTTTTATATAGGAATGTAGACACATATATAAAGAGGCTTTGTCTTTATATATTTGTGTATAGATCAAAGCACACACCCTCTCTCATATAATTG
GATATTTCCAAGAATTGAAAACCCATGTGAAGCATTATAGATAGTTTTAAATTTAACCCACTGGAGTTTTCTTGAAATACCACTTCTTTTATATTATATAAAACTAAAAACACGACTGTT
ACCTTTTGTGTGAACCAAAGGATACTTCAGATCTCAGAGCTGCCAATTATGGGGTACTAAAGGTTTTTAAGACATCCAGTTCTCCCGAATTTGGGATTGCCTCTTTTTCTTGAAATCTCT
GGAGTAGTAATTTTTTTCCCCCTTTTTTGAAGGCAGTACCTTAACTTCATATGCCTCTGACTGCCATAAGCTTTTTTGATTCTGGGATAACATAACTCCAGAAAAGACAATGAATGTGTA
ATTTGGGCCGATATTTCACTGTTTTAAATTCTGTGTTTAATTGTAAAATTAGATGCCTATTAAGAGAAATGAAGGGGAGGATCATCTTAGTGGCTTGTTTTCAGTAGTATTTTAATATCA
GCTTCTTGTAACCTTTTCCATGTTGTGAGGGTTGTAAGGGATTGTGTGGCAACAGCAGCTTCCCTTGGCTAACTCAATCTTCTACCCATTGCTTAGAGCAGGGAGCCCTCCTTATTTACT
ACTGAAGACCTTAGAGAACTCCAATTGTTTGGCATATATTTTTGGTGGTGGTTTTTATTCCTCCTGGAGAGTTATCTAATTTGTTTCTAAAACAAACAAGCAGCAAAGAAATGAATTAAA
TACTGGGGTTGAGAATTAAAATTAAGTGGATGTTCACAGTTGCCCAATATATATGACCTGCAAATGATACGAAAAAGTGCAGCATTTAGTGGCAGTTAACAAGAGTGACAAGCCTGGGGC
AGAGGTACCAAACCTCTCCCACCAGAGAGCTAGAAGTATTTTATACAGTAACTTTGATCTTATGGAAGTGACCTTCAATGCTTATTCTGAAGTAACCTATATGGTGGATACAGGATGAAC
ATTCAGTGCCAGGGAGAATCTTCTCAGGTTGGTTCTCGTTAGAGTGATAAACTGGCTAGGGGCCATAGTATTGGTCCTGTTAGGTTTCGGTCATGGAAAAAAAAATTATTTTGGGGTCAT
CCTGGCTCTAGATGTTATGGGCAAATTTCTGAAACATCTGCAAGAAGGTACCAGTTAATTATAGTGCTTAATATTGGGAATAAGATTAAGCATTATAATTATAATGTATGGGCCTGTTGG
TGTAAGCTCAGATAATTAAATAAAAATAGCATGACTCAAATGAGACATATTCTGCTGAACAGTTTCTACTTCCTCTCCCGCCTGTCCTGTCATGGGAGACGTGTATAGTTGCTGCTGTTT
CAGCAAACCACCATAAGACGAAAATGCCTCAGGTTGGGTTGCCAGTCCTTTACAACTCAGCTTGAATTTCACAACAGTGATTGTGAGAATCTGCGTGGTATACACTGAAATATCGGTGTG
CTGTGATGCAAAGCTTACCTTTGACGATATTGAATGTGATATAGCTGTAGAGAAGTACTTCCTTGCCTTATGTGAGGATTTCAAACTTATTTAAATTATGTAGACAAATCAAAGTGGCAT
TGCTTAATTTTTAGCAGGCATAATAAGCAAGTTAACAGTAAAATGCAAAACATGATAAGCGTTGCTCAATTTTTAGCAGGTATAATAAGCAGGTTAACAGTAAAAATGCAAAACATGATA
GATAAGTCACTTTGAAAATTCAAACCAAAGTTCCTTCACCTTATGGAAATAGGAAATTATGGACTTCAAAATTGGACACTTCCTGTTTACAAAAAGAAATTCAGAGCTAAAATCATGGTA
AAAAAAAATAGAAACACTTGAGAACTATGGTCTTTATGGGTGCAATTTGAAATCCTTTTCATCATCTTACCAGACTAAACTAAGAGCACATACCAAACCTATCTTATGGTTGAAAGTTGG
GGTTTATTTTTTATATGAGAATATTATCACTATTACATAACATACTCAGGACAAAGAACTTTGCTCAGGGAACATACCATGTAATATTTTTGTTGTTTCTTTACAGACTAGTCTACAGTC
CTGCTTACTCAAAACAAACCAAATAACTTATACCTTTATATAAGTATTATGTACTGATGATAGTAACTACCTCTGAGTTTGACACAGATCAAAATTTTTGAATATCAGATATCAGTTATC
CTATTTTTATTTCATGTGAAAACTCCTCTAAAGCAGATTCCCTCAACTCTGTGCATATGTGAATATCACTGATGTGAACACATTGTTCATTTACATAGGTAAAATATTACTCTGTTTACA
GCAAAAGGCTACCTCATAGTTGATACATAGCACACCTGTATGTATGCTGTTCCAGCCTTACAGGTGGCTGATAATTCTCTGGTACAGAACCTTTTTATCTGTATTATAAATAGCAATTCA
CAACTGCATGTTTCTGACAAACACTTGTGAATAATGAAGCATCTCGTTTTAGTTAGCAAAGTCTCCAAACATTTCCTTAAAATAATCATGTATTTAGTTTAAAGAATTATGGGCACTGTT
CAACTTAAGCAAAACAGAACACGGAAGCAGTCTTAGAAGCACCACTTTGCCCAGAGGTGGAGGTTGGAAGGGGTAGCAGGGAGAGGGGTTGGTGTATGCAGGTATTCATGCTAGGCAAAG
AGTTTAAAAGACGCCAATGTCCTTCATTTACTGTCTGTGCTGCCCTGAAGCCAAGCGTATTGCAGCATTATAGCCCCAGGCACATAACTAACTAGCACTGGCTTGCCAAGGAATGAACAT
GCAATGCCATTACTAGCTATTGAGGGAAAAGGGTCTGTGTGAAGCATCACTTTGCAGGGATTACTAATGGTGGGGCAGCAGGTCTGTGAATTAAGTTATCTCTTGACCTCACCCTCATGT
CAACACAAATGTAATTCCTAAACAAGATGCATTGCCAGTCTCTTAGCCCTGTAAGCTGATCTTTTGCTACATGGCAGACTATAATGAAAACATTTTTATACTTGGGTTTCTAGTCTTCAC
TAGAAGGCCTTGGATGTATTTTTGCAGTTGAAAGATTTAGAAAGATTTTTACCTGCTTATAACTTGGAAGTTTAGAGTGCAATGTAAGAAAAAAGATCAAGAAATGTCATGTTATTAGCA
TCAGTCCACCTCCAATATTGCCGATACTTTTTTTATTCTGGCTCAGTTTTATTTTGCACCAGTGCGGCCCCAAGTTACTGCTGGTTGTATTTAGTTTGTGAATAGGAGCCCATAAGTGTT
AATAGACTTTGTAACATTCACTATAAGATGAATTATACAGGACATGGGAAATCTCATTAAGTCTTAAAGTTAATTTAAATTAATTTATCTGTTTTCTCTAAGAAATGTTTATCATAAAAT
ATATATGTGTATTTCCCCTTTGGTTATAAAATTTGGGAAAGTATGTACAAGTGCAGCTGCACTGACTTTAATTTTCTAGATGTCTTAATGAGATTTATTTGTTTTAGAGAAGAACATCTT
GTTAAAAGCATCAAACTCTGTCTTACATAGCTGTCAACAGCCTCTTTAAGATGTGGTGGTTGTATGATCTGTGTCTTAATTGTTCAGTTAGAGTGAGAAGTTGACCTATGATTCATTTTT
AAATTTTATATTTGGAACAAAGCTGCAAGTTATGGTAAAGTACTGTACTGTGAGAAGTATTATGATATTTAATGCATCTGTGGCTTAACACTTGTGAGAGTTACCAGCTTGAAAATGATG
GTGTTGACTACCTCTTGAATCACATCTATCAACCACTGGCACCTACCACCAAGCTGGCTTCAATTAGTATGTGTTGCTTTTTGGTATTAACAACTAACCGTACTAGAGACCAAAGTGAAC
CCTGATTTTTATATGTCTTTAATAATGGTGTTTTATCTAGTGTTTTTAAATTATCCTGTGTAGTATTTAGATTACCTCATTGTCCATTTTGACTCATGTTGTTTACAAGTGAAAATAAAA
ACACTTGAACTGTATGTTTTTAAAAGACAAAAAAGGGGTAGATGTTTGGAATGCGTTTCACTCGCATGCAGTCATCTGGAGGGACTGAAGCACTGTTTGCCTTTCTGTACACTCTGGGTT
TTATATTCTCATTTCATGCCTAATGTCTTATTCTGTCAATTATGGATATGTTGAGGTTTAAAAAAATTACTTGATTAAAAATAAAACATATAACGTTGGCATTTAAAAAAAAAAAAA

Protein Sequence

>389421 : length: 269
MSHRRQVLQKRMRSFNQVSSAPGGASKGGGEEPGKLPEPAEEESQVLRGTGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSSKGLESIRVTG
PGGSPCLGSERRPKGKTLQKRKPKGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQEAESQPCTSTLPREVGGGHGCTSPPFPQEARAEISERSGRS
PQEASSTKSSIAPEEQSKKGPSVQKRKKT