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Cancer metastasis database

Annotation category 5

Gene information

Gene ID 284119
Symbol

PTRF

Synonymous

CAVIN|CAVIN1|CGL4|FKSG13|cavin-1

Full name

polymerase I and transcript release factor

Gene description

RNA polymerase I and transcript release factor|TTF-I interacting peptide 12

Cytoband

17q21.2

Gene type

protein-coding

Synonymous

MIM:603198; HGNC:HGNC:9688; Ensembl:ENSG00000177469; HPRD:04433; Vega:OTTHUMG00000180137

Pathway and disease

Pathways and Diseases

Detail

Pathway

General transcription by RNA polymerase I;PANTHER;P00022

Pathway

Transcription;Reactome;REACT:1788

Pathway

RNA Polymerase I Transcription Termination;PID Reactome;500577

Disease

Lipodystrophy, congenital generalized, type 4;OMIM

Sequence Information

Nucleotide Sequence

>284119 : length: 3651
AATCAGCGATCAGACTCCGGAGTTTGGCCCGGGAGCTGGGGAGCTCACCGATCCCCCGCCCAGCAGTTCTGGCCGCTGTCCCGGTGCGCACGGACGTGGCTCGAGTTTCCTCTGCTCTCC
GCTCTCGCCCGCTAGCTCTCCTCCCTTCCGCTCCTGCTTCTCTCCGGGTCTCCCGCTCCAGCTCCAGCCCCACCCGGCCGGTCCCGCACGGCTCCGGGTAGCCATGGAGGACCCCACGCT
CTATATTGTCGAGCGGCCGCTTCCCGGGTACCCCGACGCCGAGGCCCCGGAGCCTTCCTCCGCTGGGGCTCAGGCAGCGGAGGAGCCGTCGGGGGCCGGCTCAGAAGAGCTGATCAAGTC
GGACCAGGTGAACGGCGTGCTGGTGCTGAGCCTCCTGGACAAAATCATCGGGGCCGTAGACCAGATCCAGCTGACTCAAGCACAGCTGGAGGAGCGGCAGGCGGAGATGGAGGGCGCAGT
GCAGAGCATCCAGGGCGAGCTGAGCAAGCTGGGCAAGGCGCACGCCACCACGAGCAATACGGTGAGCAAGCTGCTGGAGAAGGTGCGCAAGGTCAGCGTCAACGTGAAGACCGTGCGCGG
CAGCCTGGAGCGCCAGGCGGGGCAGATCAAGAAGCTGGAGGTCAACGAGGCCGAGCTGCTGCGGCGCCGCAACTTTAAAGTCATGATCTACCAGGATGAAGTGAAGCTGCCGGCCAAACT
GAGCATCAGCAAATCGCTGAAAGAGTCGGAGGCGCTGCCAGAGAAGGAGGGCGAGGAGCTGGGCGAGGGCGAGCGGCCCGAGGAGGACGCAGCGGCGCTGGAGCTTTCGTCGGACGAGGC
GGTGGAGGTTGAGGAGGTTATTGAGGAGTCCCGCGCAGAGCGTATCAAGCGCAGCGGCCTGCGGCGCGTGGACGACTTCAAGAAGGCCTTCTCCAAGGAGAAGATGGAGAAGACCAAGGT
GCGTACCCGCGAGAACCTGGAGAAGACGCGCCTCAAGACCAAGGAAAACCTGGAGAAGACGCGGCACACCCTGGAGAAGCGCATGAACAAGCTGGGCACGCGCCTGGTGCCCGCCGAGCG
GCGCGAGAAACTGAAGACGTCGCGGGACAAGTTGCGCAAATCCTTCACGCCCGACCACGTGGTGTACGCGCGCTCCAAGACCGCGGTCTACAAGGTGCCACCCTTCACCTTCCACGTCAA
GAAGATCCGCGAGGGCCAGGTGGAAGTGCTCAAGGCCACCGAGATGGTGGAGGTGGGCGCCGACGACGACGAGGGCGGCGCGGAGCGCGGGGAGGCCGGCGACCTGCGGCGCGGGAGCAG
CCCCGACGTGCACGCGCTGCTGGAGATCACCGAGGAGTCGGACGCCGTGCTGGTGGACAAGAGCGACAGCGACTGAGCCGCCCCCGCTGCCACCCACCCCATTCCTCGCTCCTTCCGAAC
TTCCTCTTTCGCATTCTCTCTCGGCTCGAGCTGGCTGAGATTTTTCTAAATTGAAAACACGCCCCCCTCCCCACACCTCCAGGAACTCCACTCCCAGTCTTAGAGCTGTTAGGACCCGAT
GGGGAGGCAGCCCCCGCAGTGGACAACCCCCGCTTGGACACAGTCCGAGTGGAATGGGAAGGGAATGGTCAATCCCTGTCCTGGTTGTCCAAGTCGGGATCTCAGAGGAAATTGCAGTGA
TTCCACGGTTAGGCCCCCCTGGGGGGGCTGCCTTCCCCTCAGCCTCTCCCCACACCACCCACCCAGCTGCTGTCATTCCGCTCACTGAGCTCTTCTTCATTCTCACCCTGATCCCTGGGG
GACTCAAAGCCAAAACTGCCCAAAGAGGAAAGATTGAATCCTAAAGGGGATCCCTGCCCCCATGGGAGGCCCCCTACTAGAAGGACGTGAAAGCAGCTTTTGGGGGAAACTGAGGCAGTG
GGGAAGACAGAGCAGAATGAGCCCTCACCCTGGCTGGGGGTCCAGCACAGGCTGTATCTGCAGAGGGTCCCAGAGGAACGCTGGAGCCAAGAGAAGCCCTGGGAAGGAGGGGTGGGGAAC
GACATGCATGTGAGGGATGGCACACTGATGTGTTTATGCACCTGTACACAGGAGCGCATGGCCATGGCTTTGGAAAGGAGAATGGAAAAATAGAAGAAGGTCGGCCGGGCTTGGTGGCTT
ATGCCTGTAACCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACCTGAAGTCAGGAGTTCGGGACCAGCCTGGCAAACACCCCATCTCTACTAAGCGAAAACCCATCTCTACTAAAAT
TACAAAAATTAGCTGGGCATGGTTGCGCATGCCTGTAATCCCAGCTACTTTGGAGGCTGAGGTGGGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCAAGGTCGCGACAC
TGCACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTCAACAGAAGGAAAAAAAAGGAAAATAGGAGAAGGTGGAAATGGGTGAAGAGAGAAGTCCCCTCACTAGCTGCATGAGAAATCT
ATCTTACTGTGGTTCTCCATGGGCAGCAGGACCATTTTTCAGAATCAAGAGGGAGGACAGTGTGAGAAGGCGATGATCCAAAGAAGACAGAGAGGTCAGCCCCACCCGATCCCTCAAATG
GGCTCTTGGAGGCACCCCCAGGGGCAGCCCATTTCTCAAAGTCCAGAAAATTAGGGTCCCAGAAGGGGGCAGCAGCAGGCTGGGAGTTAGGAGGGAGAGCAGGGTGCCGGCCCTGCCACC
AAGTTGAGAGCTGGAGGGGAGGTGGGGAGAGAACATCACAGAGCAGCCAGCCCTGGTTCACTCCTGGCAGTTTCTTCTCAAGCTCCTTCCCTAGGAGCATGGTGGCACGTGCCTGTGGTC
TCAGCTACTTGGGAGGCTGAGGCGGGAGGATCGCCAGAGCCCAGGAGTTTGAGGCTGCAGTGAGCTATGAGGGTGCCTCTGTGCTCCATCCTAGGCAACAGAGTGATACGCTGTTTAAAA
AGGAAAAAATCCTTCCCTAGAGCTAGTATCCTAAAGCTGCAGAGCTAGCCCAGACCTCATTGGTTTCCTTGTCCTTGGGGTGCTTTTCCTGAATCTTTGCGGGTGAAGGGAGTGTTGCTC
CCAGTCCAGAGGCCTGATTCTGTTTGGACTGGGTTCTCAAGACACGACCAGGTTCTCAAGACACGAGTCCCCTTGTTCCTCCCCATTAAAGGGGGTTTGTCAGAAGCAAGAACAGCCCCT
CTCCCCAGTCACAGCCTGAAGGGAGGCCCCGAGAGCTTCCTCCTTCCCCCCACCTGCTCCTTACCTTCTCTGCCCTGCTTTTTAGAACTGCAGTTCATTGTTTTAAGGGATTGGGGGAGG
GAGCCTGGGGACACAAACCTTTTATACAATACAAAGCTTTGCTTTTTTTTTTTTTTTCTTCCTTTTCCCTTTCTCGGTTCTCTTCTCTCCTCTGAATGGCTGAAGACCCCTCTGCCGAGG
GAGGTTGGGGATTGTGGGACAAGGTCCCTTGGTGCTGATGGCCTGAAGGGGCCTGAGCTGTGGGCAGATGCAGTTTTCTGTGGGCTTGGGGAACCTCTCACGTTGCTGTGTCCTGGTGAG
CAGCCCGACCAATAAACCTGCTTTTCTAAAAGGAAAAAAAAAAAAAAAAAA

Protein Sequence

>284119 : length: 390
MEDPTLYIVERPLPGYPDAEAPEPSSAGAQAAEEPSGAGSEELIKSDQVNGVLVLSLLDKIIGAVDQIQLTQAQLEERQAEMEGAVQSIQGELSKLGKAHATTSNTVSKLLEKVRKVSVN
VKTVRGSLERQAGQIKKLEVNEAELLRRRNFKVMIYQDEVKLPAKLSISKSLKESEALPEKEGEELGEGERPEEDAAALELSSDEAVEVEEVIEESRAERIKRSGLRRVDDFKKAFSKEK
MEKTKVRTRENLEKTRLKTKENLEKTRHTLEKRMNKLGTRLVPAERREKLKTSRDKLRKSFTPDHVVYARSKTAVYKVPPFTFHVKKIREGQVEVLKATEMVEVGADDDEGGAERGEAGD
LRRGSSPDVHALLEITEESDAVLVDKSDSD