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Cancer metastasis database

Annotation category 5

Gene information

Gene ID 27339
Symbol

PRPF19

Synonymous

NMP200|PRP19|PSO4|SNEV|UBOX4|hPSO4

Full name

pre-mRNA processing factor 19

Gene description

PRP19/PSO4 homolog|PRP19/PSO4 pre-mRNA processing factor 19 homolog|nuclear matrix protein 200|nuclear matrix protein NMP200 related to splicing factor PRP19|pre-mRNA-processing factor 19|psoralen 4|senescence evasion factor

Cytoband

11q12.2

Gene type

protein-coding

Synonymous

MIM:608330; HGNC:HGNC:17896; Ensembl:ENSG00000110107; HPRD:12214; Vega:OTTHUMG00000167798

Pathway and disease

Pathways and Diseases

Detail

Pathway

Spliceosome;KEGG PATHWAY;hsa03040

Pathway

Ubiquitin mediated proteolysis;KEGG PATHWAY;hsa04120

Disease

Werner syndrome;FunDO

Sequence Information

Nucleotide Sequence

>27339 : length: 2342
GGGCAATTTCCGTTAGGTGCTGAAGGCTGTGGCGCGCGGCTGTCCCCATTCCCACGTGAAGCGCTACGCTAGCATCGCTCGGCTGGCGGCTCCCAGCTCGCCGCGGAGCAGTCCCGGCAG
CAGCGGGGGACCGGAAGTGGCTCGCGGAGGCTCAGAAGCTAGTCCCGGAGCCCGGCGTGTGGCGCCTCGGAGCACGGTGACGGCGCCATGTCCCTAATCTGCTCCATCTCTAACGAAGTG
CCGGAGCACCCATGTGTATCCCCTGTCTCTAATCATGTTTATGAGCGGCGGCTCATCGAGAAGTACATTGCGGAGAATGGTACCGACCCCATCAACAACCAGCCTCTCTCCGAGGAGCAG
CTCATCGACATCAAAGTTGCTCACCCAATCCGGCCCAAGCCTCCCTCAGCCACCAGCATCCCGGCCATTCTGAAAGCTTTGCAGGATGAGTGGGATGCAGTCATGCTGCACAGCTTCACT
CTGCGCCAGCAGCTGCAGACAACCCGCCAAGAGCTGTCACACGCTCTGTACCAGCACGATGCCGCCTGCCGTGTCATTGCCCGTCTCACCAAGGAAGTCACTGCTGCCCGAGAAGCTCTG
GCTACCCTGAAACCACAGGCTGGCCTCATTGTGCCCCAGGCTGTGCCAAGTTCCCAACCAAGTGTTGTGGGTGCGGGTGAGCCAATGGATTTGGGTGAGCTGGTGGGAATGACCCCAGAG
ATTATTCAGAAGCTTCAAGACAAAGCCACTGTGCTAACCACGGAGCGCAAGAAGAGAGGGAAGACTGTGCCTGAGGAGCTGGTGAAGCCAGAAGAGCTCAGCAAATACCGGCAGGTGGCA
TCCCACGTGGGGTTGCACAGTGCCAGCATTCCTGGGATCCTGGCCCTGGACCTCTGCCCGTCCGACACCAACAAGATCCTCACTGGTGGGGCGGATAAAAATGTCGTTGTGTTTGACAAA
AGTTCTGAACAAATCCTGGCTACCCTCAAAGGCCATACCAAGAAGGTCACCAGCGTGGTGTTTCACCCTTCCCAGGACCTGGTGTTTTCTGCTTCCCCCGATGCCACTATCAGGATTTGG
TCGGTCCCCAATGCCTCTTGTGTACAGGTGGTTCGGGCCCATGAGAGTGCTGTGACAGGCCTCAGCCTTCATGCCACTGGCGACTATCTCCTGAGCTCCTCCGATGATCAGTACTGGGCT
TTCTCTGACATCCAGACAGGGCGTGTGCTCACCAAGGTGACAGATGAGACCTCCGGCTGCTCTCTCACCTGTGCACAGTTCCACCCTGACGGACTCATCTTTGGAACAGGAACCATGGAC
TCTCAGATCAAGATCTGGGACTTGAAGGAACGTACTAATGTGGCCAACTTCCCTGGCCACTCGGGCCCCATCACTAGCATCGCCTTCTCTGAGAATGGTTACTACCTGGCTACAGCGGCT
GATGACTCCTCTGTCAAGCTCTGGGATCTGCGCAAGCTTAAGAACTTTAAGACTTTGCAGCTGGATAACAACTTTGAGGTAAAGTCACTGATCTTTGACCAGAGTGGTACCTACCTGGCT
CTTGGGGGCACGGATGTCCAGATCTACATCTGCAAACAATGGACGGAGATTCTTCACTTTACAGAGCATAGCGGCCTGACCACAGGGGTGGCCTTCGGGCATCACGCCAAGTTCATCGCT
TCAACAGGCATGGACAGAAGCCTCAAGTTCTACAGCCTGTAGGCCCTGGCCCTTCTGATGGAAGCTGGGCCTCATCTCAGTAGAGGGGTAGAATTAGGGTTTGGGGGGGGGGGTGGGGGG
AATCTATGGGGGGAGGGGGCTCTGTGGGGTGGGACATTCACATCATTTCACTCTGGTCTGAGTGGTGGCCTGAGAACCATGGTGGCATGGACCACCCTCATCCATGCAACTCCAGGCCCC
ATGGGAACGGATGTGGAAGGAAGAACTGTCACCCTCTTAAGGCCCAGGGTCGGAGCCCAGGGCCTCTCCCTTCCTGTCGTTCAATGGACGTGGTGGTGGCTGTTCCACACCCATTTTGTT
GCAGTTCCTGTGAGACAGGAGAGGCTGAGCCAAGGGAACTGTGAAGGGGATGGGCAGGAGGGCTTGTGCAGGGTTTTGTAAGCAGTGATCTAGTTTCATTAAAAAAAGAAAACAATAACC
ATAACCACCTCCCCGTGTCTGTCTGCACCAGGAGCACCTGGGACTGGGAAGGTCAAGGGGAGGGAGCACACACTGGGACACTGGCTTCCGGGAAGCCCATCTTCCTTTCCTTTCACAGCT
CTTACCCTTTTTTTTTTTTTTTAATTGCACAGCAGAAATAAAAACAAATCTGCAGATGAAAA

Protein Sequence

>27339 : length: 504
MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG
GADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP
DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG
VAFGHHAKFIASTGMDRSLKFYSL