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Cancer metastasis database

Annotation category 5

Gene information

Gene ID 27257
Symbol

LSM1

Synonymous

CASM|YJL124C

Full name

LSM1, U6 small nuclear RNA associated

Gene description

LSM1 homolog, U6 small nuclear RNA associated|U6 snRNA-associated Sm-like protein LSm1|cancer-associated Sm-like protein|small nuclear ribonuclear CaSm

Cytoband

8p11.2

Gene type

protein-coding

Synonymous

MIM:607281; HGNC:HGNC:20472; Ensembl:ENSG00000175324; HPRD:06281; Vega:OTTHUMG00000164051

Pathway and disease

Pathways and Diseases

Detail

Pathway

Metabolism of RNA;Reactome;REACT:21257

Pathway

RNA degradation;KEGG PATHWAY;hsa03018

Disease

Breast cancer;FunDO

Disease

Prostate cancer;FunDO

Sequence Information

Nucleotide Sequence

>27257 : length: 1161
TCTGCTGCCGAACCCCGAAAGCTGAGGGACGGAGGTCAGTGACTCTGGGGTCTCGGGAACCCGGAGACGAAGGAAGACACCGTGTTCCTTAAGAGGGAGTATACGTTTCCTCGCCATTTA
TCCAATGGAGTTTCCTCTTACCTACTTAACAGGAACAGGGAAAGGGTGTCCCCCAACGGTACGGCTGCCCCGCCTCTTCCTGGGGGCCCACACGTGTTACAGGAAGTGGGTAAGGGTAAT
ATGGAGGAGCTTCCGGCAGCCCCCGGCGGCTGAAAGCCGGGGCAGAAGTGCTGGTCTCGGTCGGGATTCCGGGCTTGGTCCCACCGAGGCGGCGACTGCGGTAGGAGGGAAGAGGTTTTG
GACGCGCTGGCCTCCCGCCGCTGTGCATTGCAGCATTATTTCAGTTCAAAATGAACTATATGCCTGGCACCGCCAGCCTCATCGAGGACATTGACAAAAAGCACTTGGTTCTGCTTCGAG
ATGGAAGGACACTTATAGGCTTTTTAAGAAGCATTGATCAATTTGCAAACTTAGTGCTACATCAGACTGTGGAGCGTATTCATGTGGGCAAAAAATACGGTGATATTCCTCGAGGGATTT
TTGTGGTCAGAGGAGAAAATGTGGTCCTACTAGGAGAAATAGACTTGGAAAAGGAGAGTGACACACCCCTCCAGCAAGTATCCATTGAAGAAATTCTAGAAGAACAAAGGGTGGAACAGC
AGACCAAGCTGGAAGCAGAGAAGTTGAAAGTGCAGGCCCTGAAGGACCGAGGTCTTTCCATTCCTCGAGCAGATACTCTTGATGAGTACTAATCTTTTGCCCAGAGGCTGTTGGCTCTTG
AAGAGTAGGGGCTGTCACTGAGTGAAAGTGACATCCTGGCCACCTCACGCATTTGATCACAGACTGTAGAGTTTTGAAAAGTCACTTTTATTTTTAATTATTTTACATATGCAACATGAA
GAAATCGTGTAGGTGGGTTTTTTTTTTAATAACAAAATCACTGTTTAAAGAAACAGTGGCATAGACTCCTTCACACATCACTGTGGCACCAGCAACTACTTCTTTATATTGTTCTTCATA
TCCCAAATTAGAGTTTACAGGGACAGTCTTCATTTACTTGTAAATAAAATATGAATCTCAAAAGTGTCATGTTATTTCCAA

Protein Sequence

>27257 : length: 133
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQTKLEAEKLKVQALKDR
GLSIPRADTLDEY