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Cancer metastasis database

Annotation category 5

Gene information

Gene ID 1272
Symbol

CNTN1

Synonymous

F3|GP135|MYPCN

Full name

contactin 1

Gene description

contactin-1|glycoprotein gP135|neural cell surface protein F3

Cytoband

12q11-q12

Gene type

protein-coding

Synonymous

MIM:600016; HGNC:HGNC:2171; Ensembl:ENSG00000018236; HPRD:07189; Vega:OTTHUMG00000169362

Pathway and disease

Pathways and Diseases

Detail

Pathway

Notch signaling pathway;PID Curated;200013

Pathway

Axon guidance;Reactome;REACT:18266

Pathway

Cell adhesion molecules (CAMs);KEGG PATHWAY;hsa04514

Pathway

L1CAM interactions;PID Reactome;500097

Disease

Myopathy, congenital, Compton-North;OMIM

Disease

protein quantitative trait loci;GAD

Sequence Information

Nucleotide Sequence

>1272 : length: 6020
AATTGTCTTGGTGGTGAGGTGATCAATAGCCCATTACTGGATAGAACAGCGACTACAGGAAGAGCATTGAAGATTTTAATGCATGAATTATGCATGCAGCGCTCATTCTTTAGTCTCCGA
ACAGAATGACAGGGTTTGTGAAGTCGCCTCAGATAGTTTCTTGCATTAAGTGACTGCAGTGAAATGCTTAATATTTTCAGGCATAGAAGCAGCATTGACTCGGGCCAGCCGAATTTGGAA
GATGTAAATCTCCCAGCTCACAGCACGGAATGCTTTATTTGAAAGTATTGCTATGTAGACAGCCGGCTTTTCTGTCATCTAACCTGCTCTCCCCAGGTTGGCTGAAGGATGGGAGCGGCT
GTGCCTGCCTGTGAGGTCACAGCATGAAGTCCTTTTAACTTGCTTTCTGCTGCAGGAGAGAGGCGTATTGTGGTATAACTGTTGCTGTATTTATTCAAATGGACAATTTGCAATAGATAT
TATACCCAGGACGACAGATAAGTCAACACATAAGGTGTTTAAAATTATCCAACTGCCATAGAGCTAAATTCTTTTTTGGAAAATTGAACCGAACTTCTACTGAATACAAGATGAAAATGT
GGTTGCTGGTCAGTCATCTTGTGATAATATCTATTACTACCTGTTTAGCAGAGTTTACATGGTATAGAAGATATGGTCATGGAGTTTCTGAGGAAGACAAAGGATTTGGACCAATTTTTG
AAGAGCAGCCAATCAATACCATTTATCCAGAGGAATCACTGGAAGGAAAAGTCTCACTCAACTGTAGGGCACGAGCCAGCCCTTTCCCGGTTTACAAATGGAGAATGAATAATGGGGACG
TTGATCTCACAAGTGATCGATACAGTATGGTAGGAGGAAACCTTGTTATCAACAACCCTGACAAACAGAAAGATGCTGGAATATACTACTGTTTAGCATCTAATAACTACGGGATGGTCA
GAAGCACTGAAGCAACCCTGAGCTTTGGATATCTTGATCCTTTCCCACCTGAGGAACGTCCTGAGGTCAGAGTAAAAGAAGGGAAAGGAATGGTGCTTCTCTGTGACCCCCCATACCATT
TTCCAGATGATCTTAGCTATCGCTGGCTTCTAAATGAATTTCCTGTATTTATCACAATGGATAAACGGCGATTTGTGTCTCAGACAAATGGCAATCTCTACATTGCAAATGTTGAGGCTT
CCGACAAAGGCAATTATTCCTGCTTTGTTTCCAGTCCTTCTATTACAAAGAGCGTGTTCAGCAAATTCATCCCACTCATTCCAATACCTGAACGAACAACAAAACCATATCCTGCTGATA
TTGTAGTTCAGTTCAAGGATGTATATGCATTGATGGGCCAAAATGTGACCTTAGAATGTTTTGCACTTGGAAATCCTGTTCCGGATATCCGATGGCGGAAGGTTCTAGAACCAATGCCAA
GCACTGCTGAGATTAGCACCTCTGGGGCTGTTCTTAAGATCTTCAATATTCAGCTAGAAGATGAAGGCATCTATGAATGTGAGGCTGAGAACATTAGAGGAAAGGATAAACATCAAGCAA
GAATTTATGTTCAAGCATTCCCTGAGTGGGTAGAACACATCAATGACACAGAGGTGGACATAGGCAGTGATCTCTACTGGCCTTGTGTGGCCACAGGAAAGCCCATCCCTACAATCCGAT
GGTTGAAAAATGGATATGCGTATCATAAAGGGGAATTAAGACTGTATGATGTGACTTTTGAAAATGCCGGAATGTATCAGTGCATAGCTGAAAACACATATGGAGCCATTTATGCAAATG
CTGAGTTGAAGATCTTGGCGTTGGCTCCAACTTTTGAAATGAATCCTATGAAGAAAAAGATCCTGGCTGCTAAAGGTGGAAGGGTGATAATTGAATGCAAACCTAAAGCTGCACCGAAAC
CAAAGTTTTCATGGAGTAAAGGGACAGAGTGGCTTGTCAATAGCAGCAGAATACTCATTTGGGAAGATGGTAGCTTGGAAATCAACAACATTACAAGGAATGATGGAGGTATCTATACAT
GCTTTGCAGAAAATAACAGAGGGAAAGCTAATAGCACTGGAACCCTTGTTATCACAGATCCTACGCGAATTATATTGGCCCCAATTAATGCCGATATCACAGTTGGAGAAAACGCCACCA
TGCAGTGTGCTGCGTCCTTTGATCCTGCCTTGGATCTCACATTTGTTTGGTCCTTCAATGGCTATGTGATCGATTTTAACAAAGAGAATATTCACTACCAGAGGAATTTTATGCTGGATT
CCAATGGGGAATTACTAATCCGAAATGCGCAGCTGAAACATGCTGGAAGATACACATGCACTGCCCAGACAATTGTGGACAATTCTTCAGCTTCAGCTGACCTTGTAGTGAGAGGCCCTC
CAGGCCCTCCAGGTGGTCTGAGAATAGAAGACATTAGAGCCACTTCTGTGGCACTTACTTGGAGCCGTGGTTCAGACAATCATAGTCCTATTTCTAAATACACTATCCAGACCAAGACTA
TTCTTTCAGATGACTGGAAAGATGCAAAGACAGATCCCCCAATTATTGAAGGAAATATGGAGGCAGCAAGAGCAGTGGACTTAATCCCATGGATGGAGTATGAATTCCGCGTGGTAGCAA
CCAATACACTGGGTAGAGGAGAGCCCAGTATACCATCTAACAGAATTAAAACAGACGGTGCTGCACCAAATGTGGCTCCTTCAGATGTAGGAGGTGGAGGTGGAAGAAACAGAGAGCTGA
CCATAACATGGGCGCCTTTGTCAAGAGAATACCACTATGGCAACAATTTTGGTTACATAGTGGCATTTAAGCCATTTGATGGAGAAGAATGGAAAAAAGTCACAGTTACTAATCCTGATA
CTGGCCGATATGTCCATAAAGATGAAACCATGAGCCCTTCCACTGCATTTCAAGTTAAAGTCAAGGCCTTCAACAACAAAGGAGATGGACCTTACAGCCTAGTAGCAGTCATTAATTCAG
CACAAGACGCTCCCAGTGAAGCCCCAACAGAAGTAGGTGTAAAAGTCTTATCATCTTCTGAGATATCTGTTCATTGGGAACATGTTTTAGAAAAAATAGTGGAAAGCTATCAGATTCGGT
ATTGGGCTGCCCATGACAAAGAAGAAGCTGCAAACAGAGTTCAAGTCACCAGCCAAGAGTACTCGGCCAGGCTCGAGAACCTTCTGCCAGACACCCAGTATTTTATAGAAGTCGGGGCCT
GCAATAGTGCAGGGTGTGGACCTCCAAGTGACATGATTGAGGCTTTCACCAAGAAAGCACCTCCTAGCCAGCCTCCAAGGATCATCAGTTCAGTAAGGTCTGGTTCACGCTATATAATCA
CCTGGGATCATGTCGTTGCACTATCAAATGAATCTACAGTGACGGGATATAAGGTACTCTACAGACCTGATGGCCAGCATGATGGCAAGCTGTATTCAACTCACAAACACTCCATAGAAG
TCCCAATCCCCAGAGATGGAGAATACGTTGTGGAGGTTCGCGCGCACAGTGATGGAGGAGATGGAGTGGTGTCTCAAGTCAAAATTTCAGGTGCACCCACCCTATCCCCAAGTCTTCTCG
GCTTACTGCTGCCTGCCTTTGGCATCCTTGTCTACTTGGAATTCTGAATGTGTTGTGACAGCTGCTGTTCCCATCCCAGCTCAGAAGACACCCTTCAACCCTGGGATGACCACAATTCCT
TCCAATTTCTGCGGCTCCATCCTAAGCCAAATAAATTATACTTTAACAAACTATTCAACTGATTTACAACACACATGATGACTGAGGCATTCGGGAACCCCTTCATCCAAAAGAATAAAC
TTTTAAATGGATATAAATGATTTTTAACTCGTTCCAATATGCCTTATAAACCACTTAACCTGATTCTGTGACAGTTGCATGATTTAACCCAATGGGACAAGTTACAGTGTTCAATTCAAT
ACTATAGGCTGTAGAGTGAAAGTCAAATCACCATATACAGGTGCTTTAAATTTAATAACAAGTTGTGAAATATAATAGAGATTGAAATGTTGGTTGTATGTGGTAAATGTAAGAGTAATA
CAGTCTCTTGTACTTTCCTCACTGTTTTGGGTACTGCATATTATTGAATGGCCCCTATCATTCATGACATCTTGAGTTTTCTTGAAAAGACAATAGAGTGTAACAAATATTTTGTCAGAA
ATCCCATTATCAAATCATGAGTTGAAAGATTTTGACTATTGAAAACCAAATTCTAGAACTTACTATCAGTATTCTTATTTTCAAAGGAAATAATTTTCTAAATATTTGATTTTCAGAATC
AGTTTTTTAATAGTAAAGTTAACATACCATATAGATTTTTTTTTACTTTTATATTCTACTCTGAAGTTATTTTATGCTTTTCTTATCAATTTCAAATCTCAAAAATCACAGCTCTTATCT
AGAGTATCATAATATTGCTATATTTGTTCATATGTGGAGTGACAAATTTTGAAAAGTAGAGTGCTTCCTTTTTTATTGAGATGTGACAGTCTTTACATGGTTAGGAATAAGTGACAGTTA
AGTGAATATCACAATTACTAGTATGTTGGTTTTTCTGCTTCATTCCTAAGTATTACGTTTCTTTATTGCAGATGTCAGATCAAAAAGTCACCTGTAGGTTGAAAAAGCTACCGTATTCCA
TTTTGTAAAAATAACAATAATAATAATAATAATAATTAGTTTTAAGCTCATTTCCCACTTCAATGCAATACTGAAAACTGGCTAAAAATACCAAATCAATATACTGCTAATGGTACTTTG
AAGAGTATGCAAAACTGGAAGGCCAGGAGGAGGCAAATAATATGTCTTTCCGATGGTGTCTCCCAAGTGTTGGTGCTTTGGGTTTTTATAAGTTGTGAAAAGGAAGATGCACATTTCTTC
ATTCTCCATGGTGTGCATGGAAATGTGTTTGAGTGTGGATGTAAAAGAAATCGAGTAATAAAGAATTAGCTGGCTTGTGAAATAGTGCAGTGTTGGATGCTTCAAGAGGTATAATCCTAT
TTTATTAGCACAAACTTGCTAGCTAATTAGAGTTTATCTTTTTAGAAAGGACACCGTATAGGTTCGTAAAAAATATTTACAGGAAGCAAAATAGATCTATTACTACTTTACCGACTTTAC
CCCCTTTCTTTAATTTGTATAATTTTTGTACTATATATCGATGTGTAAATGTTTAGAGTCTTCATTATGAAAATATCAATAAATATTTCATTAGTTTACATTTAACTCTGGTATAAAATG
AAACTTTTAAAAATAAGTGAAATGGATGATTTCCCAGTGGAAGTATGTCAACAGTCTTAAGATCATTGCCAGATTTCATAAAATATTTAAGTATTTGAAAAAGAAACAAAATGTCTTCAT
ACTTTAGGGAAACGAATACCCTGTATACCTTCTGTACAAATGTTTGTGTTTTCATTGTTACACTTTGGGGTTTTACTTTTGCAATGTGACCCATGTTGGGCATTTTTATATAATCAACAA
CTAAATCTTTTGCCAAATGCATGCTTGCCTTTTATTTTCTAATATATGATAATAACGAGCAAAACTGGTTAGATTTTGCATGAAATGGTTCTGAAAGGTAAGAGGAAAACAGACTTTGGA
GGTTGTTTAGTTTTGAATTTCTGACAGAGATAAAGTAGTTTAAAATCTCTCGTACACTGATAACTCAAGCTTTTCATTTTCTCATACAGTTGTACAGATTTAACTGGGACCATCAGTTTT
AAACTGTTGTCAAGCTAACTAATAATCATCTGCTTTAAGACGCAAGATTCTGAATTAAACTTTATATAGGTATAGATACATCTGTTGTTTCTTTGTATTTCAGGAAAGGTGATAGTAGTT
TTATTTGATACTGATAAATATTGAATTGATTTTTTAGTTATTTTTTATCATTTTTTCAATGGAGTAGTATAGGACTGTGCTTTGTCCTTTTTATGAATGAAAAAATTAGTATAAAGTAAT
AAATGTCTTATGTTACCCAA

Protein Sequence

>1272 : length: 1018
MKMWLLVSHLVIISITTCLAEFTWYRRYGHGVSEEDKGFGPIFEEQPINTIYPEESLEGKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASNNY
GMVRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPY
PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIP
TIRWLKNGYAYHKGELRLYDVTFENAGMYQCIAENTYGAIYANAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGG
IYTCFAENNRGKANSTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVV
RGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGRN
RELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDETMSPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLEKIVESY
QIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQHDGKLYSTHKH
SIEVPIPRDGEYVVEVRAHSDGGDGVVSQVKISGAPTLSPSLLGLLLPAFGILVYLEF