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Cancer metastasis database

Annotation category 5

Gene information

Gene ID 11338
Symbol

U2AF2

Synonymous

U2AF65

Full name

U2 small nuclear RNA auxiliary factor 2

Gene description

U2 (RNU2) small nuclear RNA auxiliary factor 2|U2 auxiliary factor 65 kDa subunit|U2 small nuclear ribonucleoprotein auxiliary factor (65kD)|U2 snRNP auxiliary factor large subunit|hU2AF65|splicing factor U2AF 65 kDa subunit

Cytoband

19q13.42

Gene type

protein-coding

Synonymous

MIM:191318; HGNC:HGNC:23156; Ensembl:ENSG00000063244; HPRD:01872; Vega:OTTHUMG00000180908

Pathway and disease

Pathways and Diseases

Detail

Pathway

Transport of Mature mRNA derived from an Intron-Containing Transcript;PID Reactome;500928

Pathway

mRNA Splicing - Major Pathway;PID Reactome;500866

Pathway

mRNA Processing;Reactome;REACT:1675

Pathway

Spliceosome;KEGG PATHWAY;hsa03040

Pathway

Transcription;Reactome;REACT:1788

Pathway

Gene Expression;Reactome;REACT:71

Pathway

Post-Elongation Processing of the Transcript;Reactome;REACT:78

Pathway

spliceosomal assembly;PID BioCarta;100033

Pathway

mRNA 3'-end processing;PID Reactome;500105

Pathway

Cleavage of Growing Transcript in the Termination Region;PID Reactome;500570

Sequence Information

Nucleotide Sequence

>11338 : length: 3229
AAAAAGCCGCGCTGGCAACCTCCGCAGCGGTCGCGCGCACCCTTCATCCCTCTTGCTGCTTTTGTCTGGCACAACCTTCTCAGGCCCTCCGCGAGGCCGGCCCTTTTTTTCTTTCACTTT
CCCCACCCGGAGAGCCAGGTGCCGAGAACTAGGACCTCGTCCCCTTCTCTATCCCTTCCCCTGATCCATCTCGTCTCTGTTCTCCTTCCCTTTTCCGTTCCCGAAGCCGGAAGGAGCCGA
GGTACCCACGGAAAAAGTCGAAGCTGTCCCCGGAGAGTGAGGCCTTCACGAAGCGGTGGCGGAAGGAGCCGAAGTTCTCTGATCGGAGGCGTGAGCAAGTGGCATCTCCGGAAAGAGCCG
AAACACGGACTCGAGCTTAATCCCAGGAGGGGCCCGAGGGCGAGATCCGGAAATCTCCGGAAAGAGCCGAAGGCCGGGACGGTTAGGATTGTCGGAAGTGGCCGATTGCTTGGACAGGGC
CGGCGGAGAAGATCGGAGCAAGTCCGTGGAAGAAGCCAAAGACTGGGACGGATTGAATTGTTGGAAGAACCCGAACTCGCAGAGGGGACTGGGCGCAGTGGCACACGAGGACACACGGAA
ACCTCCGAACGTTGAGGAGATAATCTCGGAAAAGTTACGGAAACCTGGGAAGTCGGCGAAACCCTACGTTCGGGTGTTTTCGGAAGCAGCCGAAGCGGCCGCCTGCTTCGCCTTCGTCCA
GTATCCGGAGATAGCCGAGGCGCTTCGGAGCCAGGCTCGGGGGGAGGGGCAAGCTCGCGGGCGGGCGGGCGGGTGAGGGGGCGGAGCCCGGGCGGGGCGGGGAGGGCTGCCGGAGGCTTG
ATTAGGTAGGAGGTGGCGAAGCGCCGGCGGCGGCCGGAAGTAGCCGAAGCCAGCGGCGGAAGTAGCCGAAGCGGCTGGAGCGGGCGGCAAGGCGAGGCGAAAGCTGCACAGGGCCCTACG
CGGCCGCCTCAGCATGTCGGACTTCGACGAGTTCGAGCGGCAGCTCAACGAGAATAAACAAGCCTCTAGCCCTGCCCCTCTCAGGGACGACCCTGGGGTCAGGCCCCTCAGCCCTCGAGG
GGGACCAGGAGCCAGCCTCCTCTGTCTTCTCTGGCTCCCCAGCTCCTCCTGAGCATCCTCAGAGCGGGACAAGGAGAACCGGCATCGGAAGCGCAGCCACAGCCGCTCTCGGAGCCGGGA
CCGCAAACGCCGGAGCCGGAGCCGCGACCGGCGCAACCGGGACCAGCGGAGCGCCTCCCGGGACAGGCGACGACGCAGCAAACCTTTGACCAGAGGCGCTAAAGAGGAGCACGGTGGACT
GATTCGTTCCCCCCGCCACGAGAAGAAGAAGAAGGTCCGTAAATACTGGGACGTGCCACCCCCAGGCTTTGAGCACATCACCCCAATGCAGTACAAGGCCATGCAAGCTGCGGGTCAGAT
TCCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGGTCTGGCTGTGACCCCAACGCCGGTGCCCGTGGTCGGGAGCCAGATGACCAGACAAGCCCGGCGCCTCTACGTGGGCAACAT
CCCCTTTGGCATCACTGAGTGAAATATTGTGGGGCTGAGATCCCTCGTAGCAACAAAAAGTTTGCTACCATCGTCGAAGGAGGCCATGATGGATTTCTTCAACGCCCAGATGCGCCTGGG
GGGGCTGACCCAGGCCCCTGGCAACCCAGTGTTGGCTGTGCAGATTAACCAGGACAAGAATTTTGCCTTTTTGGAGTTCCGCTCAGTGGACGAGACTACCCAGGCTATGGCCTTTGATGG
CATCATCTTCCAGGGCCAGTCACTAAAGATCCGCAGGCCTCACGACTACCAGCCGCTTCCTGGCATGTCAGAGAACCCCTCCGTCTATGTGCCTGGGGTTGTGTCCACTGTGGTCCCCGA
CTCTGCCCACAAGCTGTTCATCGGGGGCTTACCCAACTACCTGAACGATGACCAGGTCAAAGAGCTGCTGACATCCTTTGGGCCCCTCAAGGCCTTCAACCTGGTCAAGGACAGTGCCAC
GGGGCTCTCCAAGGGCTACGCCTTCTGTGAGTACGTGGACATCAACGTCACGGATCAGGCCATTGCGGGGCTGAACGGCATGCAGCTGGGGGATAAGAAGCTGCTGGTCCAGAGGGCGAG
TGTGGGAGCCAAGAATGCCACGCTGGTGAGCCCCCCGAGCACCATCAATCAGACGCCTGTGACCCTGCAAGTGCCGGGCTTGATGAGCTCCCAGGTGCAGATGGGCGGCCACCCGACTGA
GGTCCTGTGCCTCATGAACATGGTGCTGCCTGAGGAGCTGCTGGACGACGAGGAGTATGAGGAGATCGTGGAGGACGTGCGGGACGAGTGCAGCAAGTACGGGCTTGTCAAGTCCATCGA
GATCCCCCGGCCTGTGGACGGCGTCGAGGTGCCCGGCTGCGGAAAGATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAGCCATGCAGGGCCTGACGGGCCGCAAGTTCGCCAA
CAGAGTGGTTGTCACAAAATACTGTGACCCCGACTCTTATCACCGCCGGGACTTCTGGTAGAGGCGGCTGGGGGAGGGTGGGGGCAGGGCTGGCTGGGGGCTTCTCCCCACTCCCGCCCC
CCCCTTATCCCCCTCTGAAGACGATGGGCAGAGGAGTGACAGCCGCAGACACACGACAGCCGGCAGCAACTGGAATGGCAGCAATTAAGGGTGGGGGGCGGGGGTTGGGGGGTTGGGGGG
TTAGGGCAGGGAGGGGACTGGGGAAGTGCGCACACAGCCCACACAGACAACACGCACCCACACAGACACAGAGGGAAGGGGTTGGGATGGGGACAGGGTGCACAGCAGGGCGGGGTAGGA
CCCCAGCCCCTCCCAAAACAGCCTCTCCTTCTCCCATAGACCCCTTTCTTCTCCCCTTCCCCACGGTAGGAACATAGCGTGTTTATATTTTATGGCCAAACTATTTTGAATTTTGTTGTC
CGGCCCTCAGTGCCCTGCCCTCTCCCTTACCAGGACCACAGCTCTGTTCCTTCGGCCTCTGGTCCTCTCTGGTCCCCTCCTGGGTTTCTTACGTAGTTGATTTTTCCTCTTTAGTCTCCC
CCGACCTGCGCCCAGCCCCGTGGCCCCTGCCCCTCTCCTACTCTCTGTGGCAGTTTCATATTTGCTAAGACGAATTTGCTCATTAAACATTTTGTTGTATTTTACTTTA

Protein Sequence

>11338 : length: 475
MSDFDEFERQLNENKQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRRRSKPLTRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIPATA
LLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSE
NPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLVSPPSTINQTPVTLQV
PGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDFW