| General information | Literature | Expression | lncRNA |Regulation | Mutation | Homolog | Interaction |
Basic Information | |
|---|---|
Gene ID | 22938 |
Name | SNW1 |
Gene Regulation: | Transcription Factors Post Translational Modification From dbPTM Methylation Profile From DiseaseMeth database |
Transcription factors [Top] |
The investigation of TF-target regulations in human from AnimalTFDB 3.0 database and hTFtarget |
|---|
| Links to the hTFtarget for SNW1 |
| Links to the AnimalTFDB for SNW1 |
Regulation From TransFac database | RBPJK(h) + SKIP(h) <==> RBPJK(h):SKIP(h) (binding) | NICD1(r) + SKIP(h) <==> NICD1(r):SKIP(h) (binding) | SKIP(h) + SMRT(h) <==> SKIP(h):SMRT(h) (binding) | SKIP(h) + ER-alpha(h) <==> SKIP(h):ER-alpha(h) (binding). | SKIP(h) + GR(m) <==> SKIP(h):GR(m) (binding). | SKIP(h) + VDR(h) <==> SKIP(h):VDR(h) (binding). | SKIP(h) + NR1B1(m) <==> SKIP(h):NR1B1(m) (binding). | SKIP(h) + RXR-alpha(h) <==> SKIP(h):RXR-alpha(h) (binding). | SKIP(h) + Smad2-L(h) <==> SKIP(h):Smad2-L(h) (binding). | SKIP(h) + Smad3(h) <==> SKIP(h):Smad3(h) (binding). | Ku70(h) + Ccte(h) + Pds5A(h) + PPIL1(h) + eIF-3gamma(h) + SAFB1(h) + Wapl(h) + Rad21(h) + SMC-3(h) + SMC1(h) + CAPER-alpha(h) + CNOT3(h) + NCoA-5(h) + SIAHBP1(h) + FBP(h) + HYPA(h) + SKIP(h) + SRm300(h) + SRm160(h) + p54nrb/NonO(h) + rbm25(h) + rbm8A(h) + Pinin(h) + Prp19(h) + cdc5L(h) + Snrp116(h) + Prpf8(h) + Sf3b-4(h) + Sf3b-2(h) + hnRNPM(h) + hnRNP-G(h) <==> Ku70(h):Ccte(h):Pds5A(h):PPIL1(h):eIF-3gamma(h):SAFB1(h):Wapl(h):Rad21(h):SMC-3(h):SMC1(h):CAPER-alpha(h):CNOT3(h):NCoA-5(h):SIAHBP1(h):FBP(h):HYPA(h):SKIP(h):SRm300(h):SRm160(h):p54nrb/NonO(h):rbm25(h):rbm8A(h):Pinin(h):Prp19(h):cdc5L(h):Snrp116(h):Prpf8(h):Sf3b-4(h):Sf3b-2(h):hnRNPM(h):hnRNP-G(h) (binding) | SKIP(h) + DAX1(h) <==> SKIP(h):DAX1(h) (binding) | SKIP(h) + SHP(h) <==> SKIP(h):SHP(h) (binding) | SKIP(h) + alpha-actinin-2(h) <==> SKIP(h):alpha-actinin-2(h) (binding) | SKIP(h) + saal1(h) <==> SKIP(h):saal1(h) (binding) | ascc2(h) + SKIP(h) <==> ascc2(h):SKIP(h) (binding) | SNW1(h) --> SKIP(h) (expression). | SKIP(h) + RXR(m.s.) <==> SKIP(h):RXR(m.s.) (binding) | SKIP(h) + RAR(m.s.) <==> SKIP(h):RAR(m.s.) (binding) | VDR(h) + SKIP(h) <==> VDR(h):SKIP(h) (binding) | SKIP(h) + VDR(m.s.) <==> SKIP(h):VDR(m.s.) (binding) | SKIP(h) --> GH(m.s.) (increase of secretion) | SMRT-xbb2(h) + SKIP(h) <==> SMRT-xbb2(h):SKIP(h) (binding) | Daxx(h) + SKIP(h) <==> Daxx(h):SKIP(h) (binding) | SNW1(h) --> SKIP(h) (expression). |
Post Translational Modification [Top] | |||
Location (AA) | PTM type | Literature | Database | 224 | Phosphoserine (By similarity). | Swiss-Prot 53.0 | 232 | Phosphoserine (By similarity). | Swiss-Prot 53.0 | 224 | Phosphoserine | 16083285;17081983 | Phospho.ELM 6.0 | 232 | Phosphoserine | 16083285 | Phospho.ELM 6.0 |
|---|---|---|---|
Methylation Profile [Top] | ||
Chromosome | Location | Source |
|---|---|---|
chr14 |
Promoter: 77296750 - 77298750 | Agilent_014791 |
chr14 |
Promoter: 77296750 - 77298750 | GSE27584 |
chr14 |
Promoter: 77296750 - 77298750 | Agilent_014791_44K |