| General information | Literature | Expression | Regulation | Mutation | Homolog | Interaction |
Basic Information | |
|---|---|
Gene ID | 5928 |
Name | RBBP4 |
Synonymous | retinoblastoma binding protein 4;RBBP4;retinoblastoma binding protein 4 |
Definition | CAF-1 subunit C|CAF-I 48 kDa subunit|CAF-I p48|MSI1 protein homolog|RBBP-4|chromatin assembly factor 1 subunit C|chromatin assembly factor I p48 subunit|chromatin assembly factor/CAF-1 p48 subunit|histone-binding protein RBBP4|nucleosome-remodeling factor |
Position | 1p35.1 |
Gene Type | protein-coding |
Gene Regulation: | Transcription Factors Post Transcriptional Modification From dbPTM Methylation Profile From DiseaseMeth database |
Transcription Factors [Top] |
Regulation From TransFac database | HDAC1(h) + hdac2(h) + sin3a(h) + SAP30(h) + RbAp48(h) + RbAp46(h) <==> HDAC1(h):hdac2(h):sin3a(h):SAP30(h):RbAp48(h):RbAp46(h) (binding) | sin3a(h) + RbAp48(h) <==> sin3a(h):RbAp48(h) (binding) | SAP30(h) + RbAp48(h) <==> SAP30(h):RbAp48(h) (binding) | MTA1L1(h) + Mi2-BETA(h) + HDAC1(h) + RbAp48(h) + mbd3(h) <==> MTA1L1(h):Mi2-BETA(h):HDAC1(h):RbAp48(h):mbd3(h) (binding) | HDAC1(h) + MTA1L1(h) + Mi2-BETA(h) + RbAp48(h) + mbd3(h) + Sin3(h) <==> HDAC1(h):MTA1L1(h):Mi2-BETA(h):RbAp48(h):mbd3(h):Sin3(h) (binding) | BRG1(h) + hdac2(h) + RbAp48(h) + BAF155(h) + BAF60A(h) + sin3a(h) <==> BRG1(h):hdac2(h):RbAp48(h):BAF155(h):BAF60A(h):sin3a(h) (binding) | Brm(h) + HDAC1(h) + hdac2(h) + RbAp48(h) + BAF155(h) + BAF60A(h) + sin3a(h) <==> Brm(h):HDAC1(h):hdac2(h):RbAp48(h):BAF155(h):BAF60A(h):sin3a(h) (binding) | SUV39H1(m.s.) + RbAp48(h) <==> SUV39H1(m.s.):RbAp48(h) (binding) | RbAp48(h) + HDAC1(h) <==> RbAp48(h):HDAC1(h) (binding) | ING1b(h) + RbAp48(h) + SAP30(h) + HDAC1(h) + sin3a(h) + p40(h) <==> ING1b(h):RbAp48(h):SAP30(h):HDAC1(h):sin3a(h):p40(h) (binding) | ING1b(m.s.) + RbAp48(h) + SAP30(h) + HDAC1(h) + sin3a(h) <==> ING1b(m.s.):RbAp48(h):SAP30(h):HDAC1(h):sin3a(h) (binding) | RbAp48(h) + HDAC1(h) <==> RbAp48(h):HDAC1(h) (binding) | RbAp48(h) + hdac2(h) <==> RbAp48(h):hdac2(h) (binding) | RCOR1(h) + LSD1(h) + MBD2a(h) + Mi2-alpha(h) + MTA1L1(h) + sin3a(h) + RbAp48(h) + HDAC1(h) <==> RCOR1(h):LSD1(h):MBD2a(h):Mi2-alpha(h):MTA1L1(h):sin3a(h):RbAp48(h):HDAC1(h) (binding) | RCOR1(h) + MTA1L1(h) + Mi2-alpha(h) + SAP30(h) + sin3a(h) + RbAp48(h) + HDAC1(h) <==> RCOR1(h):MTA1L1(h):Mi2-alpha(h):SAP30(h):sin3a(h):RbAp48(h):HDAC1(h) (binding) | NCOR1(h) + SMRT(h) + mbd3(h) + MTA1L1(h) + Sin3B(h) + sin3a(h) + HDAC1(h) + RbAp46(h) + RbAp48(h) + HDAC7(m) <==> NCOR1(h):SMRT(h):mbd3(h):MTA1L1(h):Sin3B(h):sin3a(h):HDAC1(h):RbAp46(h):RbAp48(h):HDAC7(m) (binding) | smad4(h) + Smad1(h) + RbAp48(h) + RbAp46(h) + sin3a(h) + HDAC1(h) + Nkx3-2(c) <==> smad4(h):Smad1(h):RbAp48(h):RbAp46(h):sin3a(h):HDAC1(h):Nkx3-2(c) (binding) | RbAp48(h) + brca1(h) <==> RbAp48(h):brca1(h) (binding) | CREB1(m.s.) + RbAp48(h) <==> CREB1(m.s.):RbAp48(h) (binding) | RbAp48(h) + MBD2(h) <==> RbAp48(h):MBD2(h) (binding) | MBD2(h) + SAP30(h) + sin3a(h) + hdac2(h) + RbAp48(h) + HDAC1(h) + RbAp46(h) <==> MBD2(h):SAP30(h):sin3a(h):hdac2(h):RbAp48(h):HDAC1(h):RbAp46(h) (binding) | RbAp48(h) + pRb(m.s.) <==> RbAp48(h):pRb(m.s.) (binding) | HDAC1(m.s.) + RbAp48(h) <==> HDAC1(m.s.):RbAp48(h) (binding) | SAP30(h) + SDS3(h) + RbAp48(h) + RbAp46(h) + hdac2(h) + HDAC1(h) + SAP130(h) + sin3a(h) + BCAA(h) <==> SAP30(h):SDS3(h):RbAp48(h):RbAp46(h):hdac2(h):HDAC1(h):SAP130(h):sin3a(h):BCAA(h) (binding) | RbAp46(h) + RbAp48(h) + hdac2(h) + HDAC1(h) + MTA1L1(h) + MTA-1(h) + MBD3L(h) + MBD2a(h) <==> RbAp46(h):RbAp48(h):hdac2(h):HDAC1(h):MTA1L1(h):MTA-1(h):MBD3L(h):MBD2a(h) (binding) | hdac2(h) + HDAC1(h) + RbAp46(h) + RbAp48(h) + mbd3(h) + MTA-1(m.s.) <==> hdac2(h):HDAC1(h):RbAp46(h):RbAp48(h):mbd3(h):MTA-1(m.s.) (binding) | hdac2(h) + HDAC1(h) + RbAp46(h) + RbAp48(h) + Sin3(h) + mbd3(h) + HDAC1(m.s.) + Mi2(h) <==> hdac2(h):HDAC1(h):RbAp46(h):RbAp48(h):Sin3(h):mbd3(h):HDAC1(m.s.):Mi2(h) (binding) | hdac2(h) + HDAC1(h) + RbAp46(h) + RbAp48(h) + mbd3(h) + Mi2(h) + MTA1L1(m.s.) <==> hdac2(h):HDAC1(h):RbAp46(h):RbAp48(h):mbd3(h):Mi2(h):MTA1L1(m.s.) (binding) | CIA-II(h) + RbAp48(h) <==> CIA-II(h):RbAp48(h) (binding) | sin3a(h) + MTA1L1(h) + RCOR1(h) + RbAp48(h) + HDAC1(m.s.) <==> sin3a(h):MTA1L1(h):RCOR1(h):RbAp48(h):HDAC1(m.s.) (binding) | hdac2(h){p} + RbAp48(h) <==> hdac2(h){p}:RbAp48(h) (binding) | RbAp48(h) + hdac2(m.s.) <==> RbAp48(h):hdac2(m.s.) (binding) | p40(h) + SAP30(h) + RbAp48(h) + RbAp46(h) + HDAC1(h) + hdac2(h) + SAP130(h) + sin3a(h) + RBBP1(h) + ING2(h) <==> p40(h):SAP30(h):RbAp48(h):RbAp46(h):HDAC1(h):hdac2(h):SAP130(h):sin3a(h):RBBP1(h):ING2(h) (binding) | BAF47(h) + BAF53a(h) + BAF155(h) + BAF170(h) + RbAp48(h) + RbAp46(h) + hdac2(h) + sin3a(h) + ING2(h) <==> BAF47(h):BAF53a(h):BAF155(h):BAF170(h):RbAp48(h):RbAp46(h):hdac2(h):sin3a(h):ING2(h) (binding) | RBBP4(h) --> RbAp48(h) (expression). | RbAp48(h) + Sin3(h) <==> RbAp48(h):Sin3(h) (binding) | RbAp48(h) + brca1(h) <==> RbAp48(h):brca1(h) (binding) | RBBP4(h) --> RbAp48(h) (expression). |
|---|
Post Transcriptional Modification [Top] | |||
Location (AA) | PTM type | Literature | Database | 2 | N-acetylalanine. | Swiss-Prot 53.0 |
|---|---|---|---|
Methylation Profile [Top] | ||
Chromosome | Location | Source |
|---|---|---|
chr1 |
Promoter: 32887911 - 32889911 | GSE27584 |
chr1 |
Promoter: 32887911 - 32889911 | Agilent_014791_44K |