| General information | Literature | Expression | Regulation | Mutation | Homolog | Interaction |
Basic Information | |
|---|---|
Gene ID | 10111 |
Name | RAD50 |
Synonymous | RAD50 homolog (S. cerevisiae);RAD50;RAD50 homolog (S. cerevisiae) |
Definition | DNA repair protein RAD50 |
Position | 5q31 |
Gene Type | protein-coding |
Gene Regulation: | Transcription Factors Post Transcriptional Modification From dbPTM Methylation Profile From DiseaseMeth database |
Transcription Factors [Top] |
Regulation From TransFac database | RAD50(h) --> Rad50-isoform-1(h) (expression). | RAD50(h) --> Rad50-isoform-3(h) (expression). | Rad50(h) + NBS1(h) <==> Rad50(h):NBS1(h) (binding) | Mre11(h) + NBS1(h) + Rad50(h) <==> Mre11(h):NBS1(h):Rad50(h) (binding) | WS(h) + NBS1(h) + Mre11(h) + Rad50(h) <==> WS(h):Mre11(h):NBS1(h):Rad50(h) (binding) | TERF2IP(h) + TRF2(h) + Mre11(h) + Ku70(h) + Ku80(h) + PARP(h) + Rad50(h) <==> TERF2IP(h):TRF2(h):Mre11(h):Ku70(h):Ku80(h):PARP(h):Rad50(h) (binding) | TRF2(h) + Rad50(h) <==> TRF2(h):Rad50(h) (binding) | Rad50(h) + TERF2IP(h) <==> Rad50(h):TERF2IP(h) (binding) | Rad50(h) + TOP2BP1(h) + brca1(h) + BARD1(h) <==> Rad50(h):TOP2BP1(h):brca1(h):BARD1(h) (binding) | Mre11(h) + CtIP(h) + Bach1(h) + Rad50(h) + BARD1(h) <==> Mre11(h):CtIP(h):Bach1(h):Rad50(h):BARD1(h) (binding) | Mre11(h) + NBS1(h) + Bach1(h) + Rad50(h) + TOP2BP1(h) + BARD1(h) <==> Mre11(h):NBS1(h):Bach1(h):Rad50(h):TOP2BP1(h):BARD1(h) (binding) | Rad50(h) + BARD1(h) <==> Rad50(h):BARD1(h) (binding) | CtIP(h) + Rad50(h) + brca1(h) + BARD1(h) <==> CtIP(h):Rad50(h):brca1(h):BARD1(h) (binding) | Mre11(h) + NBS1(h) + CtIP(h) + Rad50(h) + brca1(h) <==> Mre11(h):NBS1(h):CtIP(h):Rad50(h):brca1(h) (binding) | brca1(h) + Rad50(h) + GTBP(h) <==> brca1(h):Rad50(h):GTBP(h) (binding) | Rad50(h) + brca1(h) <==> Rad50(h):brca1(h) (binding) | Rad50(h) + RECC1(h) <==> Rad50(h):RECC1(h) (binding) | GTBP(h) + Rad50(h) <==> GTBP(h):Rad50(h) (binding) | ATM(h) + Rad50(h) <==> ATM(h):Rad50(h) (binding) | Mre11(h) + Rad50(h) <==> Mre11(h):Rad50(h) (binding) | Rad50(h) + MSH2(h) <==> Rad50(h):MSH2(h) (binding) | Rad50(h) + MLH1(h) <==> Rad50(h):MLH1(h) (binding) | Rad50(h) + BLM(h) <==> Rad50(h):BLM(h) (binding) | BLM(h) + Rad50(h) + MSH2(h) + ATM(h) + brca1(h) + RECC1(h) <==> BLM(h):Rad50(h):MSH2(h):ATM(h):brca1(h):RECC1(h) (binding) | GCN5(h) + Rad50(h) <==> GCN5(h):Rad50(h) (binding) | NBS1(h) + Rad50(h) + Mre11(h) + h2ax(h){pS140} <==> NBS1(h):Rad50(h):Mre11(h):h2ax(h){pS140} (binding) | HNF-4alpha(h) + Rad50(h) <==> HNF-4alpha(h):Rad50(h) (binding) | Rad50(h) + p300(h) <==> Rad50(h):p300(h) (binding) | Rad50(h) + RCOR1(h) <==> Rad50(h):RCOR1(h) (binding) | RAD50(h) --> Rad50(h) (expression). | Mre11(h) --> Rad50(h) (increase of abundance) | RAD50(h) --> Rad50-isoform-2(h) (expression). |
|---|
Post Transcriptional Modification [Top] | |||
Location (AA) | PTM type | Literature | Database | 635 | Phosphoserine. | Swiss-Prot 53.0 | 640 | Phosphoserine. | Swiss-Prot 53.0 | 690 | Phosphothreonine. | Swiss-Prot 53.0 | 635 | Phosphoserine | 15302935;17081983 | Phospho.ELM 6.0 | 690 | Phosphothreonine | 15302935 | Phospho.ELM 6.0 | 640 | Phosphoserine | 17081983 | Phospho.ELM 6.0 |
|---|---|---|---|
Methylation Profile [Top] | ||
Chromosome | Location | Source |
|---|---|---|
chr5 |
Promoter: 131919029 - 131921029 | Agilent_014791 |
chr5 |
Promoter: 131919029 - 131921029 | GoldenGate_Methylation_Cancer_Panel_I |
chr5 |
Promoter: 131919029 - 131921029 | GoldenGate_Methylation_Cancer_Panel_I |
chr5 |
Promoter: 131919029 - 131921029 | GSE27584 |
chr5 |
Promoter: 131919029 - 131921029 | GSE27584 |
chr5 |
Promoter: 131919029 - 131921029 | Agilent_014791_44K |
chr5 |
Promoter: 131919029 - 131921029 | Agilent_014791 |