| General information | Literature | Expression | Regulation | Mutation | Homolog | Interaction |
Basic Information | |
|---|---|
Gene ID | 6385 |
Name | SDC4 |
Synonymous | syndecan 4;SDC4;syndecan 4 |
Definition | amphiglycan|ryudocan amphiglycan|ryudocan core protein|syndecan 4 (amphiglycan, ryudocan)|syndecan proteoglycan 4|syndecan-4 |
Position | 20q12 |
Gene Type | protein-coding |
Gene Regulation: | Transcription Factors Post Translational Modification From dbPTM Methylation Profile From DiseaseMeth database |
Transcription Factors [Top] |
Regulation From TransFac database | SDC4(h) --> syndecan-4(h) (expression). | syndecan-4(h) + SDF-1alpha(m.s.) <==> syndecan-4(h):SDF-1alpha(m.s.) (binding) | SDC4(h) --> syndecan-4(h) (expression). |
|---|
Post Translational Modification [Top] | |||
Location (AA) | PTM type | Literature | Database | 39 | O-linked (Xyl...) (heparan sulfate) (Bysimilarity). | Swiss-Prot 53.0 | 61 | O-linked (Xyl...) (heparan sulfate)(Potential). | Swiss-Prot 53.0 | 63 | O-linked (Xyl...) (heparan sulfate)(Potential). | Swiss-Prot 53.0 | 179 | Phosphoserine | 12377772 | Phospho.ELM 6.0 |
|---|---|---|---|
Methylation Profile [Top] | ||
Chromosome | Location | Source |
|---|---|---|
chr20 |
Promoter: 43409978 - 43411978 | Agilent_014791 |
chr20 |
Promoter: 43409978 - 43411978 | GSE27584 |
chr20 |
Promoter: 43409978 - 43411978 | Agilent_014791_44K |
chr20 |
Promoter: 43409978 - 43411978 | PMID:11313277 |