| General information | Literature | Expression | Regulation | Mutation | Homolog | Interaction |
Basic Information | |
|---|---|
Gene ID | 1288 |
Name | COL4A6 |
Synonym | CXDELq22.3|DELXq22.3|DFNX6;collagen, type IV, alpha 6;COL4A6;collagen, type IV, alpha 6 |
Definition | collagen IV, alpha-6 polypeptide|collagen alpha-6(IV) chain|collagen of basement membrane, alpha-6|dJ889N15.4 (Collagen Alpha 6(IV)) |
Position | Xq22 |
Gene Type | protein-coding |
Pathways and Diseases | |
Pathway | Amoebiasis;KEGG PATHWAY;hsa05146 |
Pathway | Focal adhesion;KEGG PATHWAY;hsa04510 |
Pathway | Small cell lung cancer;KEGG PATHWAY;hsa05222 |
Pathway | Protein digestion and absorption;KEGG PATHWAY;hsa04974 |
Pathway | ECM-receptor interaction;KEGG PATHWAY;hsa04512 |
Pathway | Integrin signalling pathway;PANTHER;P00034 |
Pathway | Pathways in cancer;KEGG PATHWAY;hsa05200 |
Disease | Leiomyomatosis, diffuse, with Alport syndrome;OMIM |
External Links | |
Links to Entrez Gene | 1288 |
Links to all GeneRIF Items | 1288 |
Links to iHOP | 1288 |
Sequence Information | |
Nucleotide Sequence | >1288 : length: 6774 ATGGAACTATCTCCTGAGTGCTGCAAGTTGTAACGGGCACCGCTGAGCCTGTTTCCCTTT GGAGCACTTCTTATCTAGAAGCAGTGTTTAGTTTCTTCCAAACTGGGCCACTTCGTCCAC CTACTCTGTTCTGAGTAAGGAAACAGCCTCCAAGCATCAGCAGAGCCCAGATGAGCACGG GCCGCGGAGCCGCTTAGCAGTCTCCCGGGACCCAGCTCCGGAGGAGCCGCAAGCATGCAC CCTGGGTTGTGGCTGCTCCTGGTTACGTTGTGCCTGACCGAGGAACTGGCAGCAGCGGGA GAGAAGTCTTATGGAAAGCCATGTGGGGGCCAGGACTGCAGTGGGAGCTGTCAGTGTTTT CCTGAGAAAGGAGCGAGAGGACGACCTGGACCAATTGGAATTCAAGGCCCAACAGGTCCT CAAGGATTCACTGGCTCTACTGGTTTATCGGGATTGAAAGGAGAAAGGGGTTTCCCAGGC CTTCTGGGACCTTATGGACCAAAAGGAGATAAGGGTCCCATGGGAGTTCCTGGCTTTCTT GGCATCAATGGGATTCCGGGCCACCCTGGACAACCAGGCCCCAGAGGCCCACCTGGTCTG GATGGCTGTAATGGAACTCAAGGAGCTGTTGGATTTCCAGGCCCTGATGGCTATCCTGGG CTTCTCGGACCACCCGGGCTTCCTGGTCAGAAAGGATCAAAAGGTGACCCTGTCCTTGCT CCAGGTAGTTTCAAAGGAATGAAGGGGGATCCTGGGCTGCCTGGACTGGATGGAATCACT GGCCCACAAGGAGCACCCGGATTTCCTGGAGCTGTAGGACCTGCAGGACCACCAGGATTA CAAGGTCCTCCAGGGCCTCCTGGTCCTCTTGGTCCTGATGGGAATATGGGGCTAGGTTTT CAAGGAGAGAAAGGAGTCAAGGGGGATGTTGGCCTCCCTGGCCCAGCAGGACCTCCACCA TCTACTGGAGAGCTGGAATTCATGGGATTCCCCAAAGGGAAGAAAGGATCCAAGGGTGAA CCAGGGCCTAAGGGTTTTCCAGGCATAAGTGGCCCTCCAGGCTTCCCGGGCCTTGGAACT ACTGGAGAAAAGGGAGAAAAGGGAGAAAAGGGAATCCCTGGTTTGCCAGGACCTAGGGGT CCCATGGGTTCAGAAGGAGTCCAAGGCCCTCCAGGGCAACAGGGCAAGAAAGGGACCCTG GGATTTCCTGGGCTTAATGGATTCCAAGGAATTGAGGGTCAAAAGGGTGACATTGGCCTG CCAGGCCCAGATGTTTTCATCGATATAGATGGTGCTGTGATCTCAGGTAATCCTGGAGAT CCTGGTGTACCTGGCCTCCCAGGCCTTAAAGGAGATGAAGGCATCCAAGGCCTACGTGGC CCTTCTGGTGTCCCTGGATTGCCAGCATTATCAGGTGTCCCAGGAGCCCTAGGGCCTCAG GGATTTCCAGGGCTGAAGGGGGACCAAGGAAACCCAGGCCGTACCACAATTGGAGCAGCT GGCCTCCCTGGCAGAGATGGTTTGCCAGGCCCACCAGGTCCACCAGGCCCACCTAGTCCA GAATTTGAGACTGAAACTCTACACAACAAAGAGTCAGGGTTCCCTGGTCTCCGAGGAGAA CAAGGTCCAAAAGGAAACCTAGGCCTCAAAGGAATAAAAGGAGACTCAGGTTTCTGTGCT TGTGACGGTGGTGTTCCCAACACTGGACCACCCGGGGAACCAGGCCCACCTGGTCCATGG GGTCTCATAGGCCTTCCAGGCCTTAAAGGAGCCAGAGGAGATCGAGGCTCTGGGGGTGCA CAGGGCCCAGCAGGGGCTCCAGGCTTAGTTGGGCCTCTGGGTCCTTCAGGACCCAAAGGA AAGAAGGGGGAACCAATTCTCAGTACAATCCAAGGAATGCCAGGAGATCGGGGTGATTCT GGCTCCCAGGGCTTCCGTGGTGTAATAGGAGAACCAGGCAAGGACGGAGTACCAGGTTTA CCAGGTCTGCCAGGCCTTCCGGGTGATGGTGGACAGGGCTTCCCAGGTGAAAAGGGGTTA CCTGGACTTCCTGGTGAAAAAGGCCATCCTGGTCCACCTGGCCTCCCAGGAAATGGGTTA CCAGGACTTCCTGGACCCCGTGGGCTTCCTGGAGATAAAGGCAAGGATGGATTACCGGGA CAACAAGGCCTTCCCGGATCTAAGGGTGACTGCTGCTGTAGAGAGGTTGGTAAAGGAGAC TTAGACACAGAGAGAGGAATCACCCTGCCCTGTATTATTCCTGGGTCATACGGTCCATCA GGATTTCCAGGCACTCCCGGATTCCCAGGCCCTAAAGGGTCTCGAGGCCTCCCTGGGACC CCAGGCCAGCCTGGGTCAAGTGGAAGTAAAGGAGAGCCAGGGAGTCCAGGATTGGTTCAT CTTCCTGAATTACCAGGATTTCCTGGACCTCGTGGGGAGAAGGGCTTGCCTGGGTTTCCT GGGCTCCCTGGAAAAGATGGCTTGCCTGGGATGATTGGCAGTCCAGGCTTACCTGGTTCC AAGGGAGCCACTGGTGACATCTTTGGTGCTGAAAATGGTGCTCCGGGGGAACAAGGCCTA CAAGGATTAACAGGGCACAAAGGATTTCTTGGAGACTCTGGCCTTCCAGGACTCAAGGGT GTGCACGGGAAGCCTGGCTTACTAGGCCCCAAAGGTGAGCGGGGCAGCCCTGGGACACCA GGACAGGTGGGACAGCCAGGCACCCCAGGATCTAGTGGTCCATATGGCATCAAGGGCAAA TCTGGGCTCCCAGGAGCACCAGGCTTCCCAGGCATCTCAGGACATCCTGGAAAGAAAGGA ACAAGAGGCAAGAAAGGTCCTCCTGGATCAATTGTAAAGAAAGGGCTGCCAGGGCTAAAA GGCCTTCCTGGAAATCCAGGCCTAGTAGGACTGAAAGGAAGCCCAGGCTCTCCAGGGGTC GCTGGGTTGCCAGCCCTCTCTGGACCCAAGGGAGAGAAGGGGTCTGTTGGATTCGTAGGT TTTCCAGGAATACCAGGTCTGCCTGGTATTCCTGGAACAAGAGGATTAAAAGGAATTCCA GGATCAACTGGAAAAATGGGACCATCTGGACGTGCTGGTACTCCTGGTGAAAAGGGAGAC AGAGGCAATCCGGGGCCAGTCGGAATACCTAGTCCAAGACGTCCAATGTCAAACCTTTGG CTCAAAGGAGACAAAGGCTCTCAAGGCTCAGCCGGATCCAATGGATTTCCTGGGCCAAGA GGTGACAAAGGAGAGGCTGGTCGACCTGGACCACCAGGCCTACCTGGAGCTCCTGGCCTC CCAGGCATTATCAAAGGAGTTAGTGGAAAGCCAGGGCCCCCTGGCTTCATGGGAATCCGG GGCTTACCTGGCCTGAAGGGGTCCTCTGGGATCACAGGTTTCCCAGGAATGCCAGGAGAA AGTGGTTCACAAGGTATCAGAGGGTCGCCTGGACTCCCAGGAGCATCTGGTCTCCCAGGC CTGAAAGGAGACAACGGCCAGACAGTTGAAATTTCCGGTAGCCCAGGACCCAAGGGACAG CCTGGCGAATCTGGTTTTAAAGGCACAAAAGGAAGAGATGGACTAATAGGCAATATAGGC TTCCCTGGAAACAAAGGTGAAGATGGAAAAGTTGGTGTTTCTGGAGATGTTGGCCTTCCT GGAGCTCCAGGATTTCCAGGAGTTGCCGGCATGAGAGGAGAACCAGGACTTCCAGGTTCT TCTGGTCACCAAGGGGCAATTGGGCCTCTAGGATCCCCCGGATTAATAGGACCCAAAGGC TTCCCTGGATTTCCTGGTTTACATGGACTGAATGGGCTTCCGGGCACCAAGGGTACCCAT GGCACTCCAGGACCTAGTATCACCGGTGTGCCTGGGCCTGCTGGTCTCCCTGGACCCAAA GGAGAAAAAGGATATCCAGGAATTGGCATCGGAGCTCCAGGGAAGCCGGGCCTGAGAGGG CAAAAAGGTGATCGAGGTTTCCCAGGTCTCCAGGGCCCTGCTGGTCTCCCCGGTGCCCCA GGCATCTCCTTGCCCTCACTCATAGCAGGACAGCCTGGTGACCCCGGGCGACCAGGCCTA GATGGAGAACGAGGCCGCCCAGGCCCCGCTGGACCCCCAGGTCCCCCTGGGCCATCCTCG AATCAAGGCGACACCGGAGACCCTGGCTTCCCTGGAATTCCTGGACCTAAAGGGCCTAAG GGAGACCAAGGAATTCCAGGTTTTTCTGGCCTCCCTGGAGAGCTAGGACTGAAAGGCATG AGAGGTGAGCCTGGCTTCATGGGGACTCCAGGCAAGGTTGGGCCACCTGGAGACCCAGGA TTTCCCGGAATGAAGGGGAAGGCAGGGCCAAGAGGCTCTTCTGGCCTCCAAGGTGATCCT GGACAAACACCAACTGCAGAAGCTGTCCAGGTTCCTCCTGGACCCTTGGGTCTACCAGGG ATCGATGGCATCCCTGGCCTCACTGGGGACCCTGGGGCTCAAGGCCCTGTAGGCCTACAA GGCTCCAAAGGTTTACCTGGCATCCCCGGTAAAGATGGCCCCAGTGGGCTCCCAGGCCCA CCTGGGGCTCTTGGTGATCCTGGTCTGCCTGGACTGCAAGGCCCTCCAGGATTTGAAGGA GCTCCAGGGCAGCAAGGCCCCTTCGGGATGCCTGGAATGCCTGGCCAGAGCATGAGAGTG GGCTACACGTTGGTAAAGCACAGCCAGTCGGAACAGGTGCCCCCGTGTCCCATCGGGATG AGCCAGCTGTGGGTGGGGTACAGCTTACTGTTTGTGGAGGGGCAAGAGAAAGCCCACAAC CAGGACCTGGGCTTTGCTGGCTCCTGTCTGCCCCGCTTCAGCACCATGCCCTTCATCTAC TGCAACATCAACGAGGTGTGCCACTATGCCAGGCGCAATGATAAATCTTACTGGCTCTCC ACTACCGCCCCTATCCCCATGATGCCCGTCAGCCAGACCCAGATTCCCCAGTACATCAGC CGCTGCTCTGTGTGTGAGGCACCCTCGCAAGCCATTGCTGTGCACAGCCAGGACATCACC ATCCCGCAGTGCCCCCTGGGCTGGCGCAGCCTCTGGATTGGGTACTCTTTCCTCATGCAC ACTGCCGCTGGTGCCGAGGGTGGAGGCCAGTCCCTGGTCTCACCTGGCTCCTGCCTAGAG GACTTTCGGGCCACTCCTTTCATCGAATGCAGTGGTGCCCGAGGCACCTGCCACTACTTT GCAAACAAGTACAGTTTCTGGTTGACCACAGTGGAGGAGAGGCAGCAGTTTGGGGAGTTG CCTGTGTCTGAAACGCTGAAAGCTGGGCAGCTCCACACTCGAGTCAGTCGCTGCCAGGTG TGTATGAAAAGCCTGTAGGGTGGCACCTGCCACTCTGCCCCTTGCCCTCCCCTGCCCCTC ACAACAGTCACCTCACAAACCTGAATGGTCTGAAGAAGGAAGGCCTGAGCCCCTTTGCCT GTCAAGTTGTACATTGGAGTCTCATTTGGGCTAGACTACCGGACACTCGTCACCCCAGCC CTCGGGTCCATAGAGATGAGCCCACCCTGCTGAGATCTGCTGTCCTGTTTCTGTCAAGCT GGTGCTACTGTTTGATTTGGATGATTGTGTGACTATTCATGGCTACCTCAGAAAGATTTG ATGGGCCACAACTGTCTTAGACTGCTAGCTTTCTCCTTACCGTCTTGATCGGAAAGCTCT TCCTAATCGCTAATCAGTCATTTCTTCATGTACAGAGGTCAGCACACATTATTTGGCTTA AACCAGAACCCAGTGTTTCCACACTTAAATTCTCTAACCGAATATTCATGGATGGCTCAA GTCTGCACAGAGCAAGTCCTCACTCTTCAAGGAGGCCCACTGTGTCTAGGCAGGCAAGAG AATTGAAATGAGGTGCCACCCAGTAGCCCAGAGTGAGCTTTAGCTCTCTCTAGAATGAGC AAGACTGGGCCCCACATGGCTTAGAGAGGCTTGAAGGCCAGCAGCTGGGTTGGGGGTGGT GGTCATTAATGGCATATGGTCCTAGACAAACCATCTCCTCCTTGCCGGCTCCCCCTCCAG CCAGAGACAGAGGATGTGGCCTGGTTCAAAGTAAAGCAGAGGATGCAACAAATGTGGCCA AGCCTATCAAAGGAAATGAGAATGACAGCCTTTTTTCCTGGGCCAGAAGTAGAGGGGTGG GTGCGTAAGGATGTGTGAGTTTTGCTTTTGACTCCAGGAACAAAAAGGTAAATCCCACAT CCCAGTTTCTCAGAAGTCCCTGTTTATTCCAAATGCCATCCAGATGTGTGCAATGTGGCA AACTGAAGCTGCACAGTGTTGGTTTCCTTGTATTCTGAGGATGTTAAAGACTTTGTTAAA TGGTTATCCAATTGCTCTTTCACAGGTAGCCTATTAAACTATTTTAATATGTTTTTTTAA ACCTCATAAAAATCTAGCACACTCTTCTCTTGAGCAGTTAGCAGACCTAAAGCAAGCCTG AATTGGCTATGCAGTACATTGTATTCTGTTTGGGGGAATTTGTTTTAGCCATTTTCTTTA ATTACCAGTTTTCCAGAACACTCTTAGCTATGTTGACATGAGGCAGTTCCTTCCAGGTGA TTCTGTTTCCTTAAGTATTATATAAACTGTGCCAATACAGACAAAGCATAATCAATATAA TCTGAATTATTGTTATCTTTACCTCCTGAGTAATAAGCATGGTGTCAGTTTTGTACATAG CAAATAAAATAAATGAAATCTGAACATGTGAAAAAAAAAAAAAAAAAAAAAAAA |
Protein Sequence | >1288 : length: 1708 MLINKLWLLLVTLCLTEELAAAGEKSYGKPCGGQDCSGSCQCFPEKGARGRPGPIGIQGP TGPQGFTGSTGLSGLKGERGFPGLLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGP PGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPVLAPGSFKGMKGDPGLPGLD GITGPQGAPGFPGAVGPAGPPGLQGPPGPPGPLGPDGNMGLGFQGEKGVKGDVGLPGPAG PPPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGPPGFPGLGTTGEKGEKGEKGIPGLPG PRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGQKGDIGLPGPDVFIDIDGAVISGN PGDPGVPGLPGLKGDEGIQGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQGNPGRTTI GAAGLPGRDGLPGPPGPPGPPSPEFETETLHNKESGFPGLRGEQGPKGNLGLKGIKGDSG FCACDGGVPNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGPLGPSG PKGKKGEPILSTIQGMPGDRGDSGSQGFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPGE KGLPGLPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGDCCCREVG KGDLDTERGITLPCIIPGSYGPSGFPGTPGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPG LVHLPELPGFPGPRGEKGLPGFPGLPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGE QGLQGLTGHKGFLGDSGLPGLKGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGI KGKSGLPGAPGFPGISGHPGKKGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGS PGVAGLPALSGPKGEKGSVGFVGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSGRAGTPGE KGDRGNPGPVGIPSPRRPMSNLWLKGDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGA PGLPGIIKGVSGKPGPPGFMGIRGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGASG LPGLKGDNGQTVEISGSPGPKGQPGESGFKGTKGRDGLIGNIGFPGNKGEDGKVGVSGDV GLPGAPGFPGVAGMRGEPGLPGSSGHQGAIGPLGSPGLIGPKGFPGFPGLHGLNGLPGTK GTHGTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLP GAPGISLPSLIAGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPK GPKGDQGIPGFSGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGLQ GDPGQTPTAEAVQVPPGPLGLPGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGL PGPPGALGDPGLPGLQGPPGFEGAPGQQGPFGMPGMPGQSMRVGYTLVKHSQSEQVPPCP IGMSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSY WLSTTAPIPMMPVSQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSF LMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQF GELPVSETLKAGQLHTRVSRCQVCMKSL |