Course realted files

Bioinformatics course-related files

The files for network prac:

Molecular biology course-related files

The tutorial file here

Genetics course-related files

All the files are free to academic researchers world wide. Not for profit purposes.
All the 377 human Epithelial-Mesenchymal Transition genes with cancer types
The protein fasta files here; The DNA sequence here; The 90 genes here.

The 716 tumor suppressor genes:
The flat files here; The protein fasta files here; The 90 genes here.

The human genes with pathway annotation:
The flat files here. Download the file, choose any pathway interesting, put into the cBio portal and inteprate the results.

When using these resources for publications, please cite:

Min Zhao, Lei Kong, Yining Liu, Hong Qu (2014) dbEMT: a literature-based resource for Epithelial-Mesenchymal Transition genes.

Min Zhao, Jingchun Sun, Zhongming Zhao (2013) TSGene: a web resource for tumor suppressor genes. Nucleic Acids Research, 41: D970-D976



Using Excel for bioinformatics

General annoucement
All the files are free to academic researchers world wide. Not for profit purposes.
General data manipulation using Excel
The protein fasta file here; The gene expression file here; The GO annotation file here.